X5DR79 (X5DR79_HUMAN) Homo sapiens (Human)
E3 ubiquitin-protein ligase parkin UniProtKBInterProInteractive Modelling
465 aa; Sequence (Fasta) ;
1 identical sequence: Homo sapiens: O60260
Available Structures
21 Experimental Structures
| Description | PDB ID | Oligo-state | Range | Seq id (%) | Ligands | |
|---|---|---|---|---|---|---|
| S65DParkin and pUB complex |
Heteromer O60260; P0CG47; | 98.73 | 1×PEG; 1×CL; 8×ZN; | |||
| WT-Parkin and pUB complex |
Heteromer O60260; P0CG47; | 100.0 | 8×ZN; 1×CL; 2×TMO; | |||
| Structure of phospho-Parkin bound to phospho-ubiquitin |
Heteromer O60260; P0CG47; | 99.68 | 6×ZN; 3×GOL; 1×MPD; 1×SO4; | |||
| Trans complex of phospho parkin |
Heteromer O60260; P62987; | 99.57 | 6×ZN; 1×GOL; 1×PEG; | |||
| Ternary trans-complex of phospho-parkin with cis ACT and pUb |
Heteromer O60260; P62987; | 99.58 | 6×ZN; 2×GOL; 1×MPD; 1×3CN; | |||
| pUbl depleted Parkin complex with pUbiquitin |
Heteromer O60260; P62987; | 99.34 | 8×ZN; 7×SO4; | |||
| ParkinK211N in complex with phospho NEDD8 |
Heteromer O60260; Q15843; | 99.68 | 8×ZN; 3×PEG; | |||
| Parkin in complex with phospho NEDD8 |
Heteromer O60260; Q15843; | 100.0 | 8×ZN; 3×EDO; | |||
| pUbl depleted phospho-Parkin(K211N,R163D) in complex with pUb |
Heteromer O60260; P62987; | 99.03 | 8×ZN; 2×PEG; | |||
| UbcH7-Ub Complex with R0RBR Parkin and phosphoubiquitin |
Heteromer O60260; P0CG47; P0CG48; P68036; | 99.69 | 8×ZN; | |||
| Structure of the autoinhibited Parkin catalytic domain | homo-6-mer | 100.0 | 48×ZN; 18×SO4; 6×GOL; | |||
| Parkin (UblR0RBR) | monomer | 100 | 8×ZN; 1×SO4; 2×GOL; 1×CL; | |||
| Parkin (S65DUblR0RBR) | monomer | 98.8 | 8×ZN; 2×GOL; 2×SO4; 1×CL; | |||
| ParkinS65N | monomer | 98.77 | 8×ZN; 1×SO4; 2×GOL; 1×CL; | |||
| Structure of Parkin-S223P E3 ligase | monomer | 99.67 | 8×ZN; 1×BA; | |||
| Structure of Parkin E3 ligase | monomer | 100.0 | 8×ZN; | |||
| Untethered R0RBR | monomer | 99.67 | 8×ZN; 2×GOL; 1×BA; | |||
| Structure of human Parkin G319A | monomer | 99.67 | 8×ZN; 6×SO4; 3×GOL; | |||
| IBR domain of Human Parkin | monomer | 100 | 2×ZN; | |||
| Solution structure of Serine 65 phosphorylated UBL domain from parkin | monomer | 100 | ||||
| Solution structure of ubiquitin-like domain of human parkin | monomer | 100 | ||||
2 SWISS-MODEL models
| Template | Oligo-state | QMEAN | Range | Ligands | Trg-Tpl Seq id (%) | |
|---|---|---|---|---|---|---|
| 5c1z.1.A | monomer | 0.73 | 8×ZN; | 99.01 | ||
| 5n2w.1.A | monomer | 0.69 | 8×ZN; 1×TMO; | 91.36 | ||