SMTL ID : 1a6a.2 (1 other biounit)

THE STRUCTURE OF AN INTERMEDIATE IN CLASS II MHC MATURATION: CLIP BOUND TO HLA-DR3

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.75 Å

Oligo State

hetero-2-2-2-mer

Ligands

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 1 residues within 4Å: Chain A: N.74 No protein-ligand interaction detected (PLIP) NAG.2: 5 residues within 4Å: Chain A: N.114, V.115, T.116, E.162, W.164 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.162 NAG.3: 1 residues within 4Å: Chain D: N.74 No protein-ligand interaction detected (PLIP) NAG.4: 5 residues within 4Å: Chain D: N.114, V.115, T.116, E.162, W.164 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:E.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ghosh, P. et al., The structure of an intermediate in class II MHC maturation: CLIP bound to HLA-DR3. Nature (1995)

Release Date

1998-05-27

Peptides

HLA class II histocompatibility antigen, DR alpha chain: AD
HLA class II histocompatibility antigen, DR-1 beta chain: BE
HLA class II histocompatibility antigen, gamma chain: CF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D
A

B
B

E
B

C
C

F
C

HLA class II histocompatibility antigen, DR alpha chain

HLA class II histocompatibility antigen, DR-1 beta chain

HLA class II histocompatibility antigen, gamma chain

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