SMTL ID : 1ao7.2 (1 other biounit)

COMPLEX BETWEEN HUMAN T-CELL RECEPTOR, VIRAL PEPTIDE (TAX), AND HLA-A 0201

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

hetero-2-2-2-2-mer

Ligands

4 x EMC: ETHYL MERCURY ION(Non-covalent)

EMC.1: 5 residues within 4Å: Chain A: E.51, H.52, S.53, L.66, C.68 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.68 EMC.2: 3 residues within 4Å: Chain A: C.92 Chain H: A.52, G.53 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:C.92 EMC.3: 5 residues within 4Å: Chain B: E.51, H.52, S.53, L.66, C.68 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:C.68 EMC.4: 3 residues within 4Å: Chain B: C.92 Chain E: A.52, G.53 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:C.92

2 x LEU- LEU- PHE- GLY- TYR- PRO- VAL- TYR- VAL: TAX PEPTIDE(Non-covalent)

LEU-LEU-PHE-GLY-TYR-PRO-VAL-TYR-VAL.5: 37 residues within 4Å: Chain C: Y.7, F.9, M.45, Y.59, E.63, K.66, V.67, H.70, Q.72, T.73, V.76, D.77, T.80, Y.84, Y.99, Y.116, T.143, K.146, W.147, V.152, Q.155, L.156, Y.159, T.163, W.167, Y.171 Chain D: Q.30, S.31, T.91, D.93, S.94 Chain E: E.30, R.94, L.97, G.99, G.100, P.102 37 PLIP interactions: 4 interactions with chain D, 29 interactions with chain C, 4 interactions with chain E Hydrogen bonds: D:Q.30, D:Q.30, D:S.31, D:S.94, C:Y.7, C:Y.59, C:E.63, C:Q.72, C:T.73, C:D.77, C:Y.99, C:T.143, C:Y.171, E:E.30, E:R.94, E:L.97 Hydrophobic interactions: C:Y.7, C:F.9, C:V.67, C:T.73, C:V.76, C:V.76, C:D.77, C:Y.99, C:T.143, C:W.147, C:V.152, C:Q.155, C:L.156, C:Y.159, C:Y.159, C:T.163, C:W.167, E:P.102 Water bridges: C:E.63, C:R.97 Salt bridges: C:K.146 LEU-LEU-PHE-GLY-TYR-PRO-VAL-TYR-VAL.6: 37 residues within 4Å: Chain F: Y.7, F.9, M.45, Y.59, E.63, K.66, V.67, H.70, Q.72, T.73, V.76, D.77, T.80, Y.84, Y.99, Y.116, T.143, K.146, W.147, V.152, Q.155, L.156, Y.159, T.163, W.167, Y.171 Chain G: Q.30, S.31, T.91, D.93, S.94 Chain H: E.30, R.94, L.97, G.99, G.100, P.102 38 PLIP interactions: 30 interactions with chain F, 5 interactions with chain G, 3 interactions with chain H Hydrophobic interactions: F:Y.7, F:F.9, F:V.67, F:T.73, F:V.76, F:V.76, F:D.77, F:Y.99, F:T.143, F:W.147, F:V.152, F:Q.155, F:L.156, F:Y.159, F:Y.159, F:T.163, F:W.167, H:P.102 Hydrogen bonds: F:Y.7, F:E.63, F:Q.72, F:T.73, F:D.77, F:Y.84, F:Y.99, F:Y.99, F:Y.159, F:Y.171, G:Q.30, G:Q.30, G:S.31, G:S.31, G:S.94, H:R.94, H:L.97 Water bridges: F:Y.59, F:R.97 Salt bridges: F:K.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garboczi, D.N. et al., Structure of the complex between human T-cell receptor, viral peptide and HLA-A2. Nature (1996)

Release Date

1997-09-17

Peptides

BETA-2 MICROGLOBULIN: AB
HLA-A 0201: CF
T CELL RECEPTOR ALPHA: DG
T CELL RECEPTOR BETA: EH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
B

C
A

F
A

D
D

G
D

E
E

H
E

BETA-2 MICROGLOBULIN

HLA-A 0201

T CELL RECEPTOR ALPHA

T CELL RECEPTOR BETA

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