- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- hetero-1-1-mer
- Ligands
- 1 x CYS- LEU- GLY- GLY- LEU- LEU- THR- MET- VAL: Latent membrane protein 2(Non-covalent)
CYS-LEU-GLY-GLY-LEU-LEU-THR-MET-VAL.1: 30 residues within 4Å:- Chain A: M.5, Y.7, F.9, M.45, Y.59, E.63, K.66, V.67, A.69, H.70, T.73, D.77, T.80, L.81, Y.84, R.97, Y.99, Y.116, T.143, K.146, W.147, V.152, Q.155, L.156, Y.159, T.163, W.167, Y.171
- Ligands: CL.3, IOD.8
30 PLIP interactions:30 interactions with chain A- Hydrophobic interactions: A:Y.7, A:F.9, A:K.66, A:V.67, A:A.69, A:T.73, A:D.77, A:L.81, A:Y.116, A:T.143, A:V.152, A:Q.155, A:L.156
- Hydrogen bonds: A:Y.7, A:Y.59, A:E.63, A:T.73, A:D.77, A:Y.84, A:R.97, A:R.97, A:Y.99, A:Y.99, A:K.146, A:Y.171, A:Y.171
- Water bridges: A:H.70, A:D.77, A:T.80
- Salt bridges: A:K.146
- 3 x IOD: IODIDE ION(Non-functional Binders)
IOD.2: 1 residues within 4Å:- Chain A: R.169
Ligand excluded by PLIPIOD.5: 4 residues within 4Å:- Chain B: N.42, G.43, Y.78, A.79
Ligand excluded by PLIPIOD.8: 3 residues within 4Å:- Chain A: K.146, W.147
- Ligands: CYS-LEU-GLY-GLY-LEU-LEU-THR-MET-VAL.1
Ligand excluded by PLIP- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 4 residues within 4Å:- Chain A: T.80, Y.84, K.146
- Ligands: CYS-LEU-GLY-GLY-LEU-LEU-THR-MET-VAL.1
Ligand excluded by PLIPCL.4: 2 residues within 4Å:- Chain A: W.51, T.178
Ligand excluded by PLIPCL.6: 2 residues within 4Å:- Chain B: R.45, R.81
Ligand excluded by PLIPCL.7: 4 residues within 4Å:- Chain B: G.29, S.57, S.61, F.62
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Simpson, A.A. et al., Structural and energetic evidence for highly peptide-specific tumor antigen targeting via allo-MHC restriction. Proc.Natl.Acad.Sci.USA (2011)
- Release Date
- 2012-01-18
- Peptides
- HLA class I histocompatibility antigen, A-2 alpha chain: A
Beta-2-microglobulin: B - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
DB
E
SMTL ID : 3rew.2 (1 other biounit)
Crystal structure of an lmp2a-derived peptide bound to human class i mhc hla-a2
HLA class I histocompatibility antigen, A-2 alpha chain
Beta-2-microglobulin
Related Entries With Identical Sequence
1a1m.1 | 1a1n.1 | 1a1o.1 | 1a6z.1 | 1a6z.2 | 1agb.1 | 1agc.1 | 1agd.1 | 1age.1 | 1agf.1 | 1akj.1 | 1ao7.1 | 1ao7.2 | 1b0g.1 | 1b0g.2 | 1b0r.1 | 1bd2.1 | 1c16.1 | 1c16.2 | 1c16.3 | 1c16.4 | 1c16.5 | 1de4.1 | 1de4.2 | 1duy.1 | 1duy.2 | 1duz.1 | 1duz.2 | 1e27.1 | 1e28.1 more...less...1eey.1 | 1eey.2 | 1eez.1 | 1eez.2 | 1exu.1 | 1hhg.1 | 1hhg.2 | 1hhh.1 | 1hhi.1 | 1hhi.2 | 1hhj.1 | 1hhj.2 | 1hhk.1 | 1hhk.2 | 1hsa.1 | 1hsa.2 | 1hsb.1 | 1i1f.1 | 1i1f.2 | 1i1y.1 | 1i1y.2 | 1i4f.1 | 1i7r.1 | 1i7r.2 | 1i7t.1 | 1i7t.2 | 1i7u.1 | 1i7u.2 | 1im3.1 | 1im3.2 | 1im3.3 | 1im3.4 | 1jf1.1 | 1jht.1 | 1lp9.1 | 1lp9.2 | 1m05.1 | 1m05.2 | 1m6o.1 | 1mi5.1 | 1n2r.1 | 1onq.1 | 1onq.2 | 1p7q.1 | 1qew.1 | 1qlf.1 | 1qr1.1 | 1qr1.2 | 1r3h.1 | 1r3h.2 | 1r3h.3 | 1r3h.4 | 1s8d.1 | 1t1w.1 | 1t1x.1 | 1t1y.1 | 1t1z.1 | 1t20.1 | 1t21.1 | 1t22.1 | 1tvb.1 | 1tvb.2 | 1tvh.1 | 1tvh.2 | 1vgk.1 | 1x7q.1 | 1xh3.1 | 1xr8.1 | 1xr9.1 | 1xz0.1 | 1xz0.2 | 1zhk.1 | 1zhl.1 | 1zs8.1 | 1zs8.2 | 1zs8.3 | 1zs8.4 | 1zs8.5 | 1zs8.6 | 1zsd.1 | 1zvs.1 | 1zvs.2 | 2ak4.1 | 2ak4.2 | 2ak4.3 | 2ak4.4 | 2axf.1 | 2axg.1 | 2cii.1 | 2cik.1 | 2clr.1 | 2clr.2 | 2f53.1 | 2f53.2 | 2fyy.1 | 2fz3.1 | 2git.1 | 2git.2 | 2gj6.1 | 2gt9.1 | 2gt9.2 | 2gtw.1 | 2gtw.2 | 2gtz.1 | 2gtz.2 | 2guo.1 | 2guo.2 | 2h26.1 | 2h6p.1 | 2hjk.1 | 2hjl.1 | 2hla.1 | 2hn7.1 | 2nw3.1 | 2nx5.1 | 2nx5.2 | 2nx5.3 | 2nx5.4 | 2po6.1 | 2po6.2 | 2rfx.1 | 2x4n.1 | 2x4n.2 | 2x4o.1 | 2x4o.2 | 2x4p.1 | 2x4p.2 | 2x4q.1 | 2x4q.2 | 2x4r.1 | 2x4r.2 | 2x4s.1 | 2x4s.2 | 2x4t.1 | 2x4t.2 | 2x4u.1 | 2x4u.2 | 2x70.1 | 2x70.2 | 2xks.1 | 2ypk.1 | 2ypl.1 | 3bh9.1 | 3bh9.2 | 3c9n.1 | 3d2u.1 | 3d2u.2 | 3d39.1 | 3d3v.1 | 3dbx.1 | 3dx6.1 | 3dx7.1 | 3dx8.1 | 3dxa.1 | 3dxa.2 | 3dxa.3 | 3fqn.1 | 3fqr.1 | 3fqt.1 | 3fqu.1 | 3fqw.1 | 3fqx.1 | 3giv.1 | 3giv.2 | 3h7b.1 | 3h7b.2 | 3h9s.1 | 3hla.1 | 3hpj.1 | 3hpj.2 | 3huj.1 | 3huj.2 | 3i6g.1 | 3i6g.2 | 3i6k.1 | 3i6k.2 | 3kla.1 | 3kla.2 | 3kpl.1 | 3kpm.1 | 3kpn.1 | 3kpp.1 | 3kpq.1 | 3kpr.1 | 3kpr.2 | 3kps.1 | 3kww.1 | 3kxf.1 | 3kxf.2 | 3kxf.3 | 3kxf.4 | 3l3d.1 | 3l3g.1 | 3l3i.1 | 3l3j.1 | 3l3k.1 | 3ln4.1 | 3ln5.1 | 3m17.2 | 3m17.4 | 3m17.6 | 3m17.8 | 3m1b.2 | 3m1b.4 | 3m1b.6 | 3m1b.8 | 3mgo.1 | 3mgo.2 | 3mgo.3 | 3mgo.4 | 3mgt.1 | 3mgt.2 | 3mgt.3 | 3mgt.4 | 3mv7.1 | 3myj.1 | 3myj.2 | 3o3a.1 | 3o3a.2 | 3o3b.1 | 3o3b.2 | 3o3d.1 | 3o3d.2 | 3o3e.1 | 3o3e.2 | 3pwj.1 | 3pwj.2 | 3pwl.1 | 3pwl.2 | 3pwn.1 | 3pwn.2 | 3pwp.1 | 3qdg.1 | 3qdj.1 | 3qdm.1 | 3qeq.1 | 3qfd.1 | 3qfd.2 | 3qfj.1 | 3rew.1 | 3rl2.1 | 3sdx.1 | 3sdx.2 | 3spv.1 | 3t8x.1 | 3t8x.2 | 3tid.1 | 3tie.1 | 3tie.2 | 3to2.1 | 3tzv.1 | 3upr.1 | 3upr.2 | 3utt.1 | 3utt.2 | 3v5d.1 | 3v5d.2 | 3v5h.1 | 3v5h.2 | 3v5k.1 | 3v5k.2 | 3vcl.1 | 3vfn.1 | 3vfo.1 | 3vfp.1 | 3vfs.1 | 3vfw.1 | 3vh8.1 | 3vh8.2 | 3vwj.1 | 3vwk.1 | 3x11.1 | 3x12.1 | 3x13.1 | 3x14.1 | 4e5x.1 | 4e5x.2 | 4eup.1 | 4eup.2 | 4ftv.1 | 4g8i.1 | 4g9d.1 | 4gup.1 | 4gup.2 | 4hwz.1 | 4hx1.1 | 4i48.1 | 4jfo.1 | 4jfo.2 | 4jqv.1 | 4jqx.1 | 4jrx.1 | 4k71.1 | 4k71.2 | 4k71.3 | 4k7f.1 | 4k7f.2 | 4l3e.1 | 4l4t.1 | 4l4t.2 | 4l4v.1 | 4l4v.2 | 4lcw.1 | 4lcw.2 | 4lnr.1 | 4mji.1 | 4mji.2 | 4n0f.1 | 4n0f.2 | 4n0f.3 | 4n0f.4 | 4n0u.1 | 4nnx.1 | 4nny.1 | 4no0.1 | 4no2.1 | 4no3.1 | 4no5.1 | 4nqc.1 | 4nqc.2 | 4nqd.1 | 4nqd.2 | 4nqd.5 | 4nqe.1 | 4nqe.2 | 4o2c.1 | 4o2e.1 | 4o2e.2 | 4o2f.1 | 4o2f.2 | 4pj7.1 | 4pj7.2 | 4pj8.1 | 4pr5.1 | 4pra.1 | 4prb.1 | 4prd.1 | 4pre.1 | 4pri.1 | 4prn.1 | 4prp.1 | 4qrr.1 | 4qru.1 | 4uq2.1 | 4uq2.2 | 4uq3.1 | 4uq3.2 | 4wj5.1 | 4wj5.2 | 4wu7.1 | 4wu7.2 | 4ww2.1 | 4x6d.1 | 4x6d.2 | 5b38.1 | 5b39.1 | 5bjt.1 | 5bjt.2 | 5bjt.3 | 5bjt.4 | 5c0b.1 | 5c0b.2 | 5ddh.1 | 5e00.1 | 5e9d.1 | 5e9d.2 | 5enw.1 | 5f1i.1 | 5f1i.2 | 5f1i.3 | 5f1i.4 | 5f1i.5 | 5f1i.6 | 5f1i.7 | 5f1i.8 | 5f7d.1 | 5fa3.1 | 5gr7.1 | 5grd.1 | 5grg.1 | 5gsb.1 | 5gsd.1 | 5gsv.1 | 5gsx.1 | 5gsx.2 | 5im7.1 | 5im7.2 | 5inc.1 | 5inc.2 | 5ind.1 | 5ind.2 | 5iro.1 | 5iro.2 | 5iro.3 | 5iro.4 | 5iro.5 | 5iro.6 | 5isz.1 | 5jzi.1 | 5jzi.2 | 5nmh.1 | 5opi.1 | 5swq.1 | 5t6w.1 | 5t6x.1 | 5t6y.1 | 5t6z.1 | 5t70.1 | 5tez.1 | 5u16.1 | 5u16.2 | 5u17.1 | 5u17.2 | 5u2v.1 | 5u2v.2 | 5u6q.1 | 5u6q.2 | 5u72.1 | 5u72.2 | 5u98.1 | 5u98.2 | 5v5m.1 | 5v5m.2 | 5vud.1 | 5vue.1 | 5vuf.1 | 5vvp.1 | 5vwd.1 | 5vwf.1 | 5vwj.1 | 5wke.1 | 5wkg.1 | 5wki.1 | 5wl1.1 | 5wwj.1 | 5wwj.2 | 5wwu.1 | 5xos.1 | 5xot.1 | 5yxn.1 | 6am5.1 | 6amt.1 | 6amt.2 | 6avf.1 | 6bj2.1 | 6bj3.1 | 6bj8.1 | 6bxp.1 | 6c97.1 | 6c97.2 | 6c98.1 | 6c98.2 | 6c99.1 | 6c99.2 | 6cug.1 | 6eny.1 | 6ewa.1 | 6ewa.2 | 6ewc.1 | 6ewc.2 | 6ewo.1 | 6ewo.2 | 6fgb.1 | 6ilm.1 | 6ilm.2 | 6ilm.3 | 6ilm.4 | 6j1v.1 | 6j1w.1 | 6j29.1 | 6j2a.1 | 6j2e.1 | 6j2e.2 | 6j2g.1 | 6j2g.2 | 6j2i.1 | 6j2i.2 | 6j2j.1 | 6j2j.2 | 6joz.1 | 6jp3.1 | 6k7t.1 | 6la6.1 | 6la6.2 | 6la6.3 | 6la6.4 | 6la7.1 | 6la7.2 | 6la7.3 | 6la7.4 | 6mtl.1 | 6mtm.1 | 6mwr.1 | 6nca.1 | 6nca.2 | 6nca.3 | 6nca.4 | 6nca.5 | 6nca.6 | 6nca.7 | 6nca.8 | 6nca.9 | 6nca.10 | 6nca.11 | 6nca.12 | 6nca.13 | 6nca.14 | 6nca.15 | 6nca.16 | 6nca.17 | 6nca.18 | 6nca.19 | 6nca.20 | 6nha.1 | 6o4y.1 | 6o4z.1 | 6o51.1 | 6o53.1 | 6opd.1 | 6p23.1 | 6p27.1 | 6p2c.1 | 6pbh.1 | 6ptb.1 | 6ptb.2 | 6pte.1 | 6pte.2 | 6pte.3 | 6pte.4 | 6pyj.1 | 6pyv.1 | 6pz5.1 | 6uln.1 | 6ulr.1 | 6uon.1 | 6uon.2 | 6uz1.1 | 6uz1.2 | 6vb1.1 | 6vb6.1 | 6vm7.1 | 6vm8.1 | 6vm9.1 | 6vma.1 | 6vmc.1 | 6vqy.1 | 6vqy.2 | 6vqz.1 | 6vqz.2 | 6wna.1 | 6wol.1 | 6wzy.1 | 6z9w.1 | 6z9w.2 | 7b5f.1 | 7c9v.1 | 7c9v.2 | 7c9v.3 | 7c9v.4 | 7edo.2 | 7kgo.1 | 7kgp.1 | 7kgq.1 | 7kgr.1 | 7kgs.1 | 7kgt.1 | 7n1b.1 | 7n1b.2 | 7n1e.1 | 7n1f.1 | 7q9b.1 | 7qpd.1 | 7rk7.1 | 7rm4.1 | 7rm4.2 | 7rm4.3 | 7rm4.4 | 7sif.1 | 7sih.1 | 7t0l.1 | 7t0l.2 | 7t5m.1 | 7t5m.2 | 7u21.1 | 7u21.2 | 7wkj.1 | 7wzz.1 | 7x00.1 | 7x1b.1 | 7x1c.1 | 7xf3.1 | 7yg3.1 | 8dv4.1 | 8eb2.1 | 8eb2.2 | 8eb2.3 | 8ec5.1 | 8elg.1 | 8elh.1 | 8erx.1 | 8esh.1 | 8i5c.1 | 8i5c.2 | 8i5c.3 | 8i5c.4 | 8i5c.5 | 8i5c.6 | 8i5c.7 | 8i5c.8 | 8i5c.9 | 8i5c.10 | 8i5d.1 | 8i5e.1 | 8isn.1 | 8isn.2