- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 2 x NDC: NICOTINAMIDE ADENINE DINUCLEOTIDE CYCLOHEXANONE(Non-covalent)
NDC.2: 28 residues within 4Å:- Chain A: A.12, G.15, G.16, I.17, D.37, R.38, Y.62, D.63, V.64, G.91, A.92, G.93, I.94, L.95, I.106, I.136, C.137, S.138, T.140, I.145, Y.151, K.155, P.181, G.182, I.183, T.184
- Ligands: CYH.3, DTT.4
24 PLIP interactions:22 interactions with chain A, 2 Ligand-Ligand interactions- Hydrophobic interactions: A:L.95, A:T.140, A:I.145, A:Y.151, A:P.181, A:I.183, ?.3
- Hydrogen bonds: A:A.12, A:L.14, A:G.15, A:G.16, A:I.17, A:D.63, A:V.64, A:G.91, A:G.93, A:K.155, A:T.184, A:T.184, A:T.184, ?.3
- Water bridges: A:G.18, A:R.102, A:T.186
NDC.6: 28 residues within 4Å:- Chain B: A.12, G.15, G.16, I.17, D.37, R.38, Y.62, D.63, V.64, G.91, A.92, G.93, I.94, L.95, I.106, I.136, C.137, S.138, T.140, I.145, Y.151, K.155, P.181, G.182, I.183, T.184
- Ligands: CYH.7, DTT.8
24 PLIP interactions:22 interactions with chain B, 2 Ligand-Ligand interactions- Hydrophobic interactions: B:L.95, B:T.140, B:I.145, B:Y.151, B:P.181, B:I.183, ?.7
- Hydrogen bonds: B:A.12, B:L.14, B:G.15, B:G.16, B:I.17, B:D.37, B:D.63, B:V.64, B:G.91, B:G.93, B:Y.151, B:K.155, B:T.184, B:T.184, ?.7
- Water bridges: B:G.18, B:R.102
- 2 x CYH: CYCLOHEXANONE(Non-covalent)
CYH.3: 7 residues within 4Å:- Chain A: G.93, I.94, L.95, Y.151, H.190, F.192
- Ligands: NDC.2
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:F.192, A:F.192
CYH.7: 7 residues within 4Å:- Chain B: G.93, I.94, L.95, Y.151, H.190, F.192
- Ligands: NDC.6
2 PLIP interactions:2 interactions with chain B,- Hydrophobic interactions: B:F.192, B:F.192
- 2 x DTT: 2,3-DIHYDROXY-1,4-DITHIOBUTANE(Non-covalent)
DTT.4: 9 residues within 4Å:- Chain A: I.183, T.184, L.188, H.190, F.192, A.203, L.206, L.207
- Ligands: NDC.2
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:L.188, A:H.190, A:H.190
- Water bridges: A:T.186, A:T.186, A:T.186
DTT.8: 9 residues within 4Å:- Chain B: I.183, T.184, L.188, H.190, F.192, A.203, L.206, L.207
- Ligands: NDC.6
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:L.188, B:H.190
- Water bridges: B:T.186, B:T.186, B:H.190
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Benach, J. et al., The catalytic reaction and inhibition mechanism of Drosophila alcohol dehydrogenase: observation of an enzyme-bound NAD-ketone adduct at 1.4 A resolution by X-ray crystallography. J.Mol.Biol. (1999)
- Release Date
- 1999-11-26
- Peptides
- ALCOHOL DEHYDROGENASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CA: CALCIUM ION(Non-covalent)
- 2 x NDC: NICOTINAMIDE ADENINE DINUCLEOTIDE CYCLOHEXANONE(Non-covalent)
- 2 x CYH: CYCLOHEXANONE(Non-covalent)
- 2 x DTT: 2,3-DIHYDROXY-1,4-DITHIOBUTANE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Benach, J. et al., The catalytic reaction and inhibition mechanism of Drosophila alcohol dehydrogenase: observation of an enzyme-bound NAD-ketone adduct at 1.4 A resolution by X-ray crystallography. J.Mol.Biol. (1999)
- Release Date
- 1999-11-26
- Peptides
- ALCOHOL DEHYDROGENASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A