SMTL ID : 1b4d.1

AMIDOCARBAMATE INHIBITOR OF GLYCOGEN PHOSPHORYLASE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x CRA: 1-DEOXY-1-METHOXYCARBAMIDO-BETA-D-GLUCO-2-HEPTULOPYRANOSONAMIDE(Non-covalent)

CRA.1: 15 residues within 4Å: Chain A: G.135, L.136, L.139, D.283, N.284, D.339, H.377, T.378, V.455, N.484, Y.573, E.672, A.673, S.674, G.675 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:L.136, A:N.284, A:N.284, A:H.377, A:N.484, A:Y.573, A:E.672, A:E.672, A:S.674, A:G.675 Water bridges: A:G.134, A:G.135, A:G.135, A:D.283, A:N.284, A:A.673

1 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)

PLP.2: 14 residues within 4Å: Chain A: G.134, G.135, W.491, V.567, K.568, K.574, Y.648, R.649, V.650, A.653, G.675, T.676, G.677, K.680 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:Y.648, A:K.680 Hydrogen bonds: A:T.676, A:T.676, A:T.676, A:G.677 Water bridges: A:G.135, A:K.568, A:K.568, A:K.574, A:K.574, A:K.574, A:G.675, A:G.675, A:N.678 Salt bridges: A:K.568, A:K.574

1 x IMP: INOSINIC ACID(Non-covalent)

IMP.3: 4 residues within 4Å: Chain A: Q.72, Y.75, R.309, R.310 7 PLIP interactions: 7 interactions with chain A Water bridges: A:R.81, A:R.242, A:R.242, A:R.310 Salt bridges: A:R.309, A:R.310 pi-Stacking: A:Y.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tsitsanou, K.E. et al., Effects of commonly used cryoprotectants on glycogen phosphorylase activity and structure. Protein Sci. (1999)

Release Date

1998-12-23

Peptides

PROTEIN (GLYCOGEN PHOSPHORYLASE B): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PROTEIN (GLYCOGEN PHOSPHORYLASE B)

Related Entries With Identical Sequence