SMTL ID : 1z6q.1

Glycogen phosphorylase with inhibitor in the AMP site

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.03 Å

Oligo State

homo-dimer

Ligands

2 x 195: 4-{2,4-BIS[(3-NITROBENZOYL)AMINO]PHENOXY}PHTHALIC ACID(Non-covalent)

195.1: 18 residues within 4Å: Chain A: W.67, I.68, Q.71, Q.72, Y.75, E.76, R.81, Y.155, K.191, R.193, R.309, R.310 Chain B: V.40, K.41, D.42, R.43, N.44, V.45 18 PLIP interactions: 14 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:Q.71, A:Q.72, A:Q.72, A:Y.75, B:V.40, B:N.44 Hydrogen bonds: A:I.68, A:Q.72, A:Q.72, A:E.76, B:D.42, B:D.42 Salt bridges: A:R.81, A:R.309, A:R.310, A:R.310 pi-Stacking: A:W.67, A:W.67 195.2: 18 residues within 4Å: Chain A: V.40, K.41, D.42, R.43, N.44, V.45 Chain B: W.67, I.68, Q.71, Q.72, Y.75, E.76, R.81, Y.155, K.191, R.193, R.309, R.310 18 PLIP interactions: 4 interactions with chain A, 14 interactions with chain B Hydrophobic interactions: A:V.40, A:N.44, B:Q.71, B:Q.72, B:Q.72, B:Y.75 Hydrogen bonds: A:D.42, A:D.42, B:I.68, B:Q.72, B:Q.72, B:Y.155 Salt bridges: B:R.81, B:R.309, B:R.310, B:R.310 pi-Stacking: B:W.67, B:W.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kristiansen, M. et al., Identification, synthesis and chracterization of new glycogen phosphorylase inhibitors binding to the allosteric AMP site. J.Med.Chem. (2004)

Release Date

2005-04-12

Peptides

Glycogen phosphorylase, muscle form: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glycogen phosphorylase, muscle form

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