SMTL ID : 1cjv.1

COMPLEX OF GS-ALPHA WITH THE CATALYTIC DOMAINS OF MAMMALIAN ADENYLYL CYCLASE: COMPLEX WITH BETA-L-2',3'-DIDEOXYATP, MG, AND ZN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: D.33, D.77 Ligands: MG.2, DAD.4 3 PLIP interactions: 2 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.33, A:D.77, H2O.1 ZN.8: 3 residues within 4Å: Chain C: R.42, E.209, H.220 2 PLIP interactions: 2 interactions with chain C Metal complexes: C:E.209, C:H.220

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: D.33, I.34, D.77 Ligands: ZN.1, DAD.4 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:D.33, A:I.34, A:D.77 MG.6: 3 residues within 4Å: Chain C: S.54, T.204 Ligands: GSP.9 4 PLIP interactions: 2 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:S.54, C:T.204, H2O.2, H2O.2

1 x FOK: FORSKOLIN(Non-covalent)

FOK.3: 14 residues within 4Å: Chain A: F.31, L.75, Y.80, V.143, W.144, S.145, V.148, T.149, N.152 Chain B: F.26, Y.30, I.71, G.72, S.73 11 PLIP interactions: 7 interactions with chain A, 4 interactions with chain B Hydrophobic interactions: A:F.31, A:L.75, A:Y.80, A:V.148, A:T.149, B:F.26, B:Y.30, B:I.71 Hydrogen bonds: A:V.143, A:S.145, B:S.73

1 x DAD: 2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

DAD.4: 20 residues within 4Å: Chain A: D.33, I.34, E.35, G.36, F.37, T.38, L.75, G.76, D.77, R.121 Chain B: K.69, D.149, I.150, V.155, N.156, S.159, R.160, K.196 Ligands: ZN.1, MG.2 11 PLIP interactions: 7 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:K.69, B:D.149, B:N.156, A:G.36, A:F.37, A:T.38 Salt bridges: B:R.160, B:R.160, B:K.196, B:K.196, A:R.121

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.5: 3 residues within 4Å: Chain A: H.153, Y.190, E.193 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Salt bridges: A:H.153, A:E.193, B:K.27

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 3 residues within 4Å: Chain C: A.48, S.51, A.249 Ligand excluded by PLIP

1 x GSP: 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE(Non-covalent)

GSP.9: 21 residues within 4Å: Chain C: G.49, E.50, S.51, G.52, K.53, S.54, T.55, D.173, L.198, R.199, R.201, T.204, G.226, N.292, K.293, D.295, L.296, C.365, A.366, V.367 Ligands: MG.6 23 PLIP interactions: 23 interactions with chain C Hydrogen bonds: C:E.50, C:S.51, C:G.52, C:K.53, C:K.53, C:S.54, C:S.54, C:T.55, C:T.55, C:L.198, C:T.204, C:T.204, C:T.204, C:G.226, C:N.292, C:K.293, C:K.293, C:A.366, C:V.367 Water bridges: C:V.202 Salt bridges: C:K.53, C:D.295 pi-Cation interactions: C:K.293

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tesmer, J.J. et al., Two-metal-Ion catalysis in adenylyl cyclase. Science (1999)

Release Date

1999-08-31

Peptides

ADENYLATE CYCLASE, TYPE V: A
ADENYLATE CYCLASE, TYPE II: B
GUANINE NUCLEOTIDE-BINDING PROTEIN G(S): C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

ADENYLATE CYCLASE, TYPE V

ADENYLATE CYCLASE, TYPE II

GUANINE NUCLEOTIDE-BINDING PROTEIN G(S)

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