- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x BGC: beta-D-glucopyranose(Non-covalent)
- 6 x CA: CALCIUM ION(Non-covalent)
CA.2: 4 residues within 4Å:- Chain A: A.269, Y.271, D.273, E.309
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:A.269, A:Y.271, A:E.309, H2O.1, H2O.2
CA.3: 2 residues within 4Å:- Chain A: E.253, Y.263
5 PLIP interactions:2 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:E.253, A:Y.263, H2O.1, H2O.1, H2O.2
CA.4: 3 residues within 4Å:- Chain A: G.247, P.248
- Ligands: PQQ.5
4 PLIP interactions:2 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:G.247, A:P.248, H2O.1, H2O.2
CA.7: 2 residues within 4Å:- Chain B: E.253, Y.263
5 PLIP interactions:2 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:E.253, B:Y.263, H2O.11, H2O.12, H2O.13
CA.8: 4 residues within 4Å:- Chain B: A.269, Y.271, D.273, E.309
5 PLIP interactions:3 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:A.269, B:Y.271, B:E.309, H2O.12, H2O.12
CA.9: 3 residues within 4Å:- Chain B: G.247, P.248
- Ligands: PQQ.10
4 PLIP interactions:2 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:G.247, B:P.248, H2O.12, H2O.13
- 2 x PQQ: PYRROLOQUINOLINE QUINONE(Non-covalent)
PQQ.5: 18 residues within 4Å:- Chain A: Q.76, H.144, R.228, N.229, Q.231, Q.246, G.247, P.248, Y.343, W.346, T.348, A.350, L.376, K.377, R.406, R.408
- Ligands: BGC.1, CA.4
16 PLIP interactions:16 interactions with chain A- Hydrophobic interactions: A:A.350, A:K.377
- Hydrogen bonds: A:R.228, A:R.228, A:N.229, A:Q.231, A:Q.246, A:R.406
- Water bridges: A:G.247, A:A.350, A:R.408, A:R.408, A:R.408
- Salt bridges: A:K.377, A:R.406, A:R.408
PQQ.10: 18 residues within 4Å:- Chain B: Q.76, H.144, R.228, N.229, Q.231, Q.246, G.247, P.248, Y.343, W.346, T.348, A.350, L.376, K.377, R.406, R.408
- Ligands: BGC.6, CA.9
22 PLIP interactions:22 interactions with chain B- Hydrophobic interactions: B:Y.343, B:A.350, B:K.377
- Hydrogen bonds: B:Q.76, B:R.228, B:R.228, B:N.229, B:Q.231, B:Q.246, B:T.348, B:R.406
- Water bridges: B:Q.76, B:G.247, B:Y.343, B:Y.343, B:A.350, B:R.408, B:R.408, B:R.408
- Salt bridges: B:K.377, B:R.406, B:R.408
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Oubrie, A. et al., Structure and mechanism of soluble quinoprotein glucose dehydrogenase. EMBO J. (1999)
- Release Date
- 2000-02-04
- Peptides
- SOLUBLE QUINOPROTEIN GLUCOSE DEHYDROGENASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x BGC: beta-D-glucopyranose(Non-covalent)
- 6 x CA: CALCIUM ION(Non-covalent)
- 2 x PQQ: PYRROLOQUINOLINE QUINONE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Oubrie, A. et al., Structure and mechanism of soluble quinoprotein glucose dehydrogenase. EMBO J. (1999)
- Release Date
- 2000-02-04
- Peptides
- SOLUBLE QUINOPROTEIN GLUCOSE DEHYDROGENASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B