SMTL ID : 1cxq.1

ATOMIC RESOLUTION ASV INTEGRASE CORE DOMAIN FROM AMMONIUM SULFATE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.02 Å

Oligo State

homo-dimer

Ligands

2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.1: 6 residues within 4Å: Chain A: P.26, S.28, W.29, G.47, R.48, V.49 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.47, A:V.49 Water bridges: A:S.28, A:R.48, A:R.48 Salt bridges: A:R.48 EPE.4: 6 residues within 4Å: Chain B: P.26, S.28, W.29, G.47, R.48, V.49 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:G.47, B:V.49 Water bridges: B:S.28, B:R.48, B:R.48 Salt bridges: B:R.48

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: V.43, T.44, T.60, A.143 Chain B: T.60 Ligands: GOL.5 No protein-ligand interaction detected (PLIP) GOL.3: 1 residues within 4Å: Chain A: A.94 No protein-ligand interaction detected (PLIP) GOL.5: 6 residues within 4Å: Chain A: T.60 Chain B: V.43, T.44, T.60, A.143 Ligands: GOL.2 No protein-ligand interaction detected (PLIP) GOL.6: 1 residues within 4Å: Chain B: A.94 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lubkowski, J. et al., Atomic resolution structures of the core domain of avian sarcoma virus integrase and its D64N mutant. Biochemistry (1999)

Release Date

1999-09-08

Peptides

AVIAN SARCOMA VIRUS INTEGRASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

AVIAN SARCOMA VIRUS INTEGRASE

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