SMTL ID : 1d01.2 (1 other biounit)

STRUCTURE OF TNF RECEPTOR ASSOCIATED FACTOR 2 IN COMPLEX WITH A HUMAN CD30 PEPTIDE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-trimer

Ligands

3 x ACE- MET- LEU- SER- VAL- GLU- GLU- GLU- GLY: CD30 PEPTIDE(Non-covalent)

ACE-MET-LEU-SER-VAL-GLU-GLU-GLU-GLY.1: 19 residues within 4Å: Chain A: R.60, Y.62, D.66, G.67, F.77, D.112, A.113, F.114, R.115, P.116, D.117, S.120, S.122, F.123, A.133, S.134, G.135, C.136, P.137 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:F.77, A:D.117 Hydrogen bonds: A:D.66, A:D.66, A:T.68, A:A.113, A:R.115, A:R.115, A:D.117, A:S.120, A:A.133, A:A.133, A:S.134, A:S.134, A:G.135, A:G.135 Water bridges: A:D.66, A:S.120, A:S.121 Salt bridges: A:R.60 ACE-MET-LEU-SER-VAL-GLU-GLU-GLU-GLY.2: 19 residues within 4Å: Chain B: R.60, Y.62, D.66, G.67, F.77, D.112, A.113, F.114, R.115, P.116, D.117, S.120, S.122, F.123, A.133, S.134, G.135, C.136, P.137 19 PLIP interactions: 19 interactions with chain B Hydrophobic interactions: B:F.77, B:D.117 Hydrogen bonds: B:Y.62, B:Y.62, B:D.66, B:D.66, B:T.68, B:A.113, B:R.115, B:R.115, B:D.117, B:A.133, B:A.133, B:S.134, B:G.135 Water bridges: B:S.120, B:S.120, B:S.121 Salt bridges: B:R.60 ACE-MET-LEU-SER-VAL-GLU-GLU-GLU-GLY.3: 20 residues within 4Å: Chain C: R.60, Y.62, D.66, G.67, F.77, D.112, A.113, F.114, R.115, P.116, D.117, S.120, S.122, F.123, I.132, A.133, S.134, G.135, C.136, P.137 21 PLIP interactions: 21 interactions with chain C Hydrophobic interactions: C:F.77, C:D.117, C:P.137 Hydrogen bonds: C:Y.62, C:D.66, C:D.66, C:T.68, C:A.113, C:R.115, C:R.115, C:D.117, C:A.133, C:A.133, C:S.134, C:G.135 Water bridges: C:D.66, C:D.66, C:S.120, C:S.121, C:S.121 Salt bridges: C:R.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ye, H. et al., The structural basis for the recognition of diverse receptor sequences by TRAF2. Mol.Cell (1999)

Release Date

2003-12-02

Peptides

TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED FACTOR 2: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

C
F

TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED FACTOR 2

Related Entries With Identical Sequence