SMTL ID : 1ddl.4 (4 other biounits)

DESMODIUM YELLOW MOTTLE TYMOVIRUS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-trimer

Ligands

1 x U- U- U- U- U- U- U: RNA (5'-R(P*UP*UP*UP*UP*UP*UP*U)-3')(Non-covalent)

U-U-U-U-U-U-U.1: 19 residues within 4Å: Chain A: V.24, G.25, N.26 Chain B: L.7, A.8, H.9, Q.10, A.11, S.12, L.13, N.14, K.16 Chain C: G.112, G.113, L.114, H.115, N.133, T.135, N.136 Protein-ligand interaction information (PLIP) not available

1 x U- U: RNA (5'-R(P*UP*U)-3')(Non-covalent)

U-U.2: 16 residues within 4Å: Chain A: L.93, V.94, W.95, V.107, L.108, T.110, Y.111, G.112, G.113, L.114, V.130, E.131, A.132, N.133, N.136 Chain B: L.184 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Larson, S.B. et al., Refined structure of desmodium yellow mottle tymovirus at 2.7 A resolution. J.Mol.Biol. (2000)

Release Date

2000-10-30

Peptides

DESMODIUM YELLOW MOTTLE VIRUS: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

DESMODIUM YELLOW MOTTLE VIRUS

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