SMTL ID : 1e2h.1

The nucleoside binding site of Herpes simplex type 1 thymidine kinase analyzed by X-ray crystallography

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 9 residues within 4Å: Chain A: P.12, H.13, G.14, M.15, G.16, K.17, T.18, R.175, R.177 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:G.14, A:M.15, A:G.16, A:K.17, A:T.18, A:T.18, A:R.175 Water bridges: A:T.19 Salt bridges: A:K.17, A:R.177 SO4.2: 7 residues within 4Å: Chain B: H.13, G.14, M.15, G.16, K.17, T.18, R.171 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:G.14, B:M.15, B:G.16, B:K.17, B:T.18, B:R.171 Water bridges: B:K.17, B:T.19, B:E.38 Salt bridges: B:K.17

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vogt, J. et al., Nucleoside Binding Site of Herpes Simplex Type 1 Thymidine Kinase Analyzed by X-Ray Crystallography. Proteins: Struct.,Funct., Genet. (2000)

Release Date

2000-11-06

Peptides

THYMIDINE KINASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

THYMIDINE KINASE

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