- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x FE: FE (III) ION(Non-covalent)
- 8 x BPY: BIPHENYL-2,3-DIOL(Non-covalent)
BPY.2: 15 residues within 4Å:- Chain A: H.145, V.147, I.172, F.186, H.194, F.201, H.208, H.209, H.240, N.242, D.243, Y.249, E.260, T.280
- Ligands: FE.1
8 PLIP interactions:8 interactions with chain A- Hydrophobic interactions: A:V.147, A:I.172, A:F.186, A:F.201, A:H.240
- Hydrogen bonds: A:E.260
- pi-Stacking: A:H.209, A:H.240
BPY.4: 15 residues within 4Å:- Chain B: H.145, V.147, I.172, F.186, H.194, F.201, H.208, H.209, H.240, N.242, D.243, Y.249, E.260, T.280
- Ligands: FE.3
8 PLIP interactions:8 interactions with chain B- Hydrophobic interactions: B:V.147, B:I.172, B:F.186, B:F.201, B:H.240
- Hydrogen bonds: B:E.260
- pi-Stacking: B:H.209, B:H.240
BPY.6: 15 residues within 4Å:- Chain C: H.145, V.147, I.172, F.186, H.194, F.201, H.208, H.209, H.240, N.242, D.243, Y.249, E.260, T.280
- Ligands: FE.5
8 PLIP interactions:8 interactions with chain C- Hydrophobic interactions: C:V.147, C:I.172, C:F.186, C:F.201, C:H.240
- Hydrogen bonds: C:E.260
- pi-Stacking: C:H.209, C:H.240
BPY.8: 15 residues within 4Å:- Chain D: H.145, V.147, I.172, F.186, H.194, F.201, H.208, H.209, H.240, N.242, D.243, Y.249, E.260, T.280
- Ligands: FE.7
8 PLIP interactions:8 interactions with chain D- Hydrophobic interactions: D:V.147, D:I.172, D:F.186, D:F.201, D:H.240
- Hydrogen bonds: D:E.260
- pi-Stacking: D:H.209, D:H.240
BPY.10: 15 residues within 4Å:- Chain E: H.145, V.147, I.172, F.186, H.194, F.201, H.208, H.209, H.240, N.242, D.243, Y.249, E.260, T.280
- Ligands: FE.9
9 PLIP interactions:9 interactions with chain E- Hydrophobic interactions: E:V.147, E:I.172, E:F.186, E:F.201, E:H.240
- Hydrogen bonds: E:Y.249, E:E.260
- pi-Stacking: E:H.209, E:H.240
BPY.12: 15 residues within 4Å:- Chain F: H.145, V.147, I.172, F.186, H.194, F.201, H.208, H.209, H.240, N.242, D.243, Y.249, E.260, T.280
- Ligands: FE.11
9 PLIP interactions:9 interactions with chain F- Hydrophobic interactions: F:V.147, F:I.172, F:F.186, F:F.201, F:H.240
- Hydrogen bonds: F:Y.249, F:E.260
- pi-Stacking: F:H.209, F:H.240
BPY.14: 15 residues within 4Å:- Chain G: H.145, V.147, I.172, F.186, H.194, F.201, H.208, H.209, H.240, N.242, D.243, Y.249, E.260, T.280
- Ligands: FE.13
9 PLIP interactions:9 interactions with chain G- Hydrophobic interactions: G:V.147, G:I.172, G:F.186, G:F.201, G:H.240
- Hydrogen bonds: G:Y.249, G:E.260
- pi-Stacking: G:H.209, G:H.240
BPY.16: 15 residues within 4Å:- Chain H: H.145, V.147, I.172, F.186, H.194, F.201, H.208, H.209, H.240, N.242, D.243, Y.249, E.260, T.280
- Ligands: FE.15
9 PLIP interactions:9 interactions with chain H- Hydrophobic interactions: H:V.147, H:I.172, H:F.186, H:F.201, H:H.240
- Hydrogen bonds: H:Y.249, H:E.260
- pi-Stacking: H:H.209, H:H.240
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Uragami, Y. et al., Crystal structures of substrate free and complex forms of reactivated BphC, an extradiol type ring-cleavage dioxygenase. J.Inorg.Biochem. (2001)
- Release Date
- 2001-02-28
- Peptides
- 2,3-DIHYDROXYBIPHENYL-1,2-DIOXYGENASE: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-octamer
- Ligands
- 8 x FE: FE (III) ION(Non-covalent)
- 8 x BPY: BIPHENYL-2,3-DIOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Uragami, Y. et al., Crystal structures of substrate free and complex forms of reactivated BphC, an extradiol type ring-cleavage dioxygenase. J.Inorg.Biochem. (2001)
- Release Date
- 2001-02-28
- Peptides
- 2,3-DIHYDROXYBIPHENYL-1,2-DIOXYGENASE: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A