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SMTL ID : 1ewa.1
Dehaloperoxidase and 4-iodophenol
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.50 Å
Oligo State
homo-dimer
Ligands
2 x
SO4
:
SULFATE ION
(Non-functional Binders)
SO4.1:
4 residues within 4Å:
Chain A:
G.1
,
F.2
,
K.3
,
D.116
5
PLIP interactions
:
5 interactions with chain A
Hydrogen bonds:
A:F.2
,
A:K.3
Water bridges:
A:D.116
,
A:S.119
,
A:S.119
SO4.4:
4 residues within 4Å:
Chain B:
G.1
,
F.2
,
K.3
,
D.116
6
PLIP interactions
:
6 interactions with chain B
Hydrogen bonds:
B:F.2
,
B:K.3
,
B:D.116
Water bridges:
B:G.1
,
B:Q.4
,
B:S.119
2 x
HEM
:
PROTOPORPHYRIN IX CONTAINING FE
(Non-covalent)
HEM.2:
18 residues within 4Å:
Chain A:
F.24
,
E.31
,
Y.34
,
F.35
,
H.55
,
K.58
,
V.59
,
L.62
,
M.63
,
L.83
,
M.86
,
Q.88
,
H.89
,
L.92
,
N.96
,
F.97
,
L.127
Ligands:
IOL.3
16
PLIP interactions
:
16 interactions with chain A
,
Hydrophobic interactions:
A:F.24
,
A:F.35
,
A:V.59
,
A:L.83
,
A:L.83
,
A:Q.88
,
A:L.92
,
A:F.97
,
A:L.127
Salt bridges:
A:H.55
,
A:H.55
,
A:K.58
pi-Stacking:
A:H.89
,
A:H.89
pi-Cation interactions:
A:H.89
Metal complexes:
A:H.89
HEM.5:
19 residues within 4Å:
Chain B:
F.24
,
E.31
,
Y.34
,
F.35
,
H.55
,
K.58
,
V.59
,
L.62
,
M.63
,
L.83
,
M.86
,
Q.88
,
H.89
,
L.92
,
N.96
,
F.97
,
L.100
,
L.127
Ligands:
IOL.6
22
PLIP interactions
:
22 interactions with chain B
,
Hydrophobic interactions:
B:F.24
,
B:F.35
,
B:F.35
,
B:V.59
,
B:L.62
,
B:L.62
,
B:L.83
,
B:L.83
,
B:Q.88
,
B:L.92
,
B:N.96
,
B:F.97
,
B:F.97
,
B:L.127
Salt bridges:
B:K.36
,
B:H.55
,
B:H.55
,
B:K.58
pi-Stacking:
B:H.89
,
B:H.89
pi-Cation interactions:
B:H.89
Metal complexes:
B:H.89
2 x
IOL
:
4-IODOPHENOL
(Non-covalent)
IOL.3:
7 residues within 4Å:
Chain A:
F.21
,
F.35
,
Y.38
,
H.55
,
T.56
,
V.59
Ligands:
HEM.2
5
PLIP interactions
:
5 interactions with chain A
Hydrophobic interactions:
A:F.35
,
A:T.56
,
A:V.59
,
A:V.59
pi-Stacking:
A:F.21
IOL.6:
6 residues within 4Å:
Chain B:
F.21
,
F.35
,
H.55
,
T.56
,
V.59
Ligands:
HEM.5
8
PLIP interactions
:
8 interactions with chain B
Hydrophobic interactions:
B:F.21
,
B:F.21
,
B:F.35
,
B:F.35
,
B:T.56
,
B:V.59
,
B:V.59
Hydrogen bonds:
B:H.55
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
LaCount, M.W. et al., The crystal structure and amino acid sequence of dehaloperoxidase from Amphitrite ornata indicate common ancestry with globins. J.Biol.Chem. (2000)
Release Date
2000-05-10
Peptides
DEHALOPEROXIDASE:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
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DEHALOPEROXIDASE
Toggle Identical (AB)
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