SMTL ID : 1fbg.1

CRYSTALLOGRAPHIC STUDIES OF THE CATALYTIC MECHANISM OF THE NEUTRAL FORM OF FRUCTOSE-1,6-BISPHOSPHATASE

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-tetramer

Ligands

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 6 residues within 4Å: Chain A: E.97, D.118, D.121, R.276, E.280 Ligands: AHM.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Ligand interactions Metal complexes: A:E.97, A:D.118, A:D.121, A:E.280, AHM.2 MN.3: 5 residues within 4Å: Chain B: E.97, D.118, D.121, E.280 Ligands: AHM.4 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Ligand interactions Metal complexes: B:E.97, B:D.118, B:D.121, B:E.280, AHM.4 MN.5: 6 residues within 4Å: Chain C: E.97, D.118, D.121, R.276, E.280 Ligands: AHM.6 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Ligand interactions Metal complexes: C:E.97, C:D.118, C:D.121, C:E.280, AHM.6 MN.7: 5 residues within 4Å: Chain D: E.97, D.118, D.121, E.280 Ligands: AHM.8 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Ligand interactions Metal complexes: D:E.97, D:D.118, D:D.121, D:E.280, AHM.8

4 x AHM: 2,5-anhydro-1,6-di-O-phosphono-D-mannitol(Non-covalent)

AHM.2: 19 residues within 4Å: Chain A: E.97, L.120, D.121, G.122, S.123, S.124, N.212, Y.215, Y.244, G.246, S.247, M.248, Y.264, K.269, K.274, R.276, E.280 Chain B: R.243 Ligands: MN.1 15 PLIP interactions: 14 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:E.97, A:L.120, A:D.121, A:D.121, A:G.122, A:S.123, A:N.212, A:Y.244, A:M.248, A:Y.264, A:K.274 Salt bridges: A:K.269, A:K.274, A:R.276, B:R.243 AHM.4: 17 residues within 4Å: Chain A: R.243 Chain B: E.97, D.118, L.120, D.121, G.122, S.123, S.124, N.212, Y.215, Y.244, G.246, S.247, M.248, Y.264, K.274 Ligands: MN.3 13 PLIP interactions: 12 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:L.120, B:D.121, B:G.122, B:S.123, B:N.212, B:Y.215, B:Y.215, B:Y.244, B:M.248, B:Y.264, B:K.274 Salt bridges: B:K.274, A:R.243 AHM.6: 19 residues within 4Å: Chain C: E.97, L.120, D.121, G.122, S.123, S.124, N.212, Y.215, Y.244, G.246, S.247, M.248, Y.264, K.269, K.274, R.276, E.280 Chain D: R.243 Ligands: MN.5 13 PLIP interactions: 12 interactions with chain C, 1 interactions with chain D Hydrogen bonds: C:L.120, C:D.121, C:G.122, C:S.123, C:N.212, C:Y.244, C:M.248, C:Y.264, C:K.274 Salt bridges: C:K.269, C:K.274, C:R.276, D:R.243 AHM.8: 17 residues within 4Å: Chain C: R.243 Chain D: E.97, D.118, L.120, D.121, G.122, S.123, S.124, N.212, Y.215, Y.244, G.246, S.247, M.248, Y.264, K.274 Ligands: MN.7 14 PLIP interactions: 13 interactions with chain D, 1 interactions with chain C Hydrogen bonds: D:L.120, D:D.121, D:D.121, D:G.122, D:S.123, D:N.212, D:Y.215, D:Y.215, D:Y.244, D:M.248, D:Y.264, D:K.274 Salt bridges: D:K.274, C:R.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Y. et al., Crystallographic studies of the catalytic mechanism of the neutral form of fructose-1,6-bisphosphatase. Biochemistry (1993)

Release Date

1993-10-31

Peptides

FRUCTOSE 1,6-BISPHOSPHATASE: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
A

D
B

FRUCTOSE 1,6-BISPHOSPHATASE

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