SMTL ID : 1fi2.1

CRYSTAL STRUCTURE OF GERMIN (OXALATE OXIDASE)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-hexamer

Ligands

6 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: H.88, H.90, E.95, H.137 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.88, A:H.90, A:E.95, A:H.137, H2O.11, H2O.21 MN.2: 4 residues within 4Å: Chain B: H.88, H.90, E.95, H.137 6 PLIP interactions: 4 interactions with chain B, 2 Ligand-Water interactions Metal complexes: B:H.88, B:H.90, B:E.95, B:H.137, H2O.264, H2O.274 MN.3: 4 residues within 4Å: Chain C: H.88, H.90, E.95, H.137 6 PLIP interactions: 4 interactions with chain C, 2 Ligand-Water interactions Metal complexes: C:H.88, C:H.90, C:E.95, C:H.137, H2O.517, H2O.527 MN.4: 4 residues within 4Å: Chain D: H.88, H.90, E.95, H.137 6 PLIP interactions: 4 interactions with chain D, 2 Ligand-Water interactions Metal complexes: D:H.88, D:H.90, D:E.95, D:H.137, H2O.770, H2O.780 MN.5: 4 residues within 4Å: Chain E: H.88, H.90, E.95, H.137 6 PLIP interactions: 4 interactions with chain E, 2 Ligand-Water interactions Metal complexes: E:H.88, E:H.90, E:E.95, E:H.137, H2O.1023, H2O.1033 MN.6: 4 residues within 4Å: Chain F: H.88, H.90, E.95, H.137 6 PLIP interactions: 4 interactions with chain F, 2 Ligand-Water interactions Metal complexes: F:H.88, F:H.90, F:E.95, F:H.137, H2O.1276, H2O.1286

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Woo, E.J. et al., Germin is a manganese containing homohexamer with oxalate oxidase and superoxide dismutase activities. Nat.Struct.Biol. (2000)

Release Date

2001-05-01

Peptides

OXALATE OXIDASE: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

OXALATE OXIDASE

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