- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.94 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x PEP: PHOSPHOENOLPYRUVATE(Non-functional Binders)
PEP.3: 11 residues within 4Å:- Chain A: K.41, S.43, K.46, D.81, Q.99, P.101, A.102, K.124, R.154, H.185, F.220
14 PLIP interactions:14 interactions with chain A- Hydrogen bonds: A:S.43, A:A.102
- Water bridges: A:K.46, A:N.48, A:N.48, A:F.103, A:R.154
- Salt bridges: A:K.41, A:K.46, A:K.124, A:K.124, A:R.154, A:H.185, A:H.185
PEP.4: 11 residues within 4Å:- Chain B: K.41, S.43, K.46, D.81, Q.99, P.101, A.102, K.124, R.154, H.185, F.220
14 PLIP interactions:14 interactions with chain B- Hydrogen bonds: B:S.43, B:A.102
- Water bridges: B:K.41, B:K.41, B:N.48, B:N.48, B:R.154
- Salt bridges: B:K.41, B:K.46, B:K.124, B:K.124, B:R.154, B:H.185, B:H.185
PEP.7: 11 residues within 4Å:- Chain C: K.41, S.43, K.46, D.81, Q.99, P.101, A.102, K.124, R.154, H.185, F.220
16 PLIP interactions:16 interactions with chain C- Hydrogen bonds: C:S.43, C:A.102
- Water bridges: C:K.46, C:N.48, C:N.48, C:D.81, C:D.81, C:F.103, C:R.154
- Salt bridges: C:K.41, C:K.46, C:K.124, C:K.124, C:R.154, C:H.185, C:H.185
PEP.8: 11 residues within 4Å:- Chain D: K.41, S.43, K.46, D.81, Q.99, P.101, A.102, K.124, R.154, H.185, F.220
15 PLIP interactions:15 interactions with chain D- Hydrogen bonds: D:S.43, D:A.102
- Water bridges: D:K.41, D:K.41, D:N.48, D:N.48, D:D.81, D:R.154
- Salt bridges: D:K.41, D:K.46, D:K.124, D:K.124, D:R.154, D:H.185, D:H.185
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Duewel, H.S. et al., Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism. J.Biol.Chem. (2001)
- Release Date
- 2001-04-21
- Peptides
- 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.94 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x PEP: PHOSPHOENOLPYRUVATE(Non-functional Binders)
- Links
- RCSB PDBe PDBj PDBsum CATH PLIP
- Citation
-
Duewel, H.S. et al., Substrate and metal complexes of 3-deoxy-D-manno-octulosonate-8-phosphate synthase from Aquifex aeolicus at 1.9-A resolution. Implications for the condensation mechanism. J.Biol.Chem. (2001)
- Release Date
- 2001-04-21
- Peptides
- 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B