SMTL ID : 1g4a.1

CRYSTAL STRUCTURES OF THE HSLVU PEPTIDASE-ATPASE COMPLEX REVEAL AN ATP-DEPENDENT PROTEOLYSIS MECHANISM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-6-12-mer

Ligands

6 x DAT: 2'-DEOXYADENOSINE-5'-DIPHOSPHATE(Non-covalent)

DAT.1: 15 residues within 4Å: Chain A: H.16, I.17, I.18, T.59, G.60, V.61, G.62, K.63, T.64, E.65, L.335, I.343, A.392, R.393, H.396 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:E.65 Hydrogen bonds: A:I.18, A:I.18, A:P.58, A:G.60, A:T.64, A:T.64, A:E.65 Salt bridges: A:K.63, A:R.393, A:R.393 DAT.2: 15 residues within 4Å: Chain B: H.16, I.17, I.18, P.58, T.59, G.60, V.61, G.62, K.63, T.64, E.65, L.335, I.343, A.392, R.393 14 PLIP interactions: 14 interactions with chain B Hydrophobic interactions: B:E.65 Hydrogen bonds: B:I.18, B:I.18, B:P.58, B:G.60, B:V.61, B:G.62, B:T.64, B:T.64, B:E.65 Salt bridges: B:K.63, B:R.393, B:R.393 pi-Cation interactions: B:H.396 DAT.3: 15 residues within 4Å: Chain G: H.16, I.17, I.18, T.59, G.60, V.61, G.62, K.63, T.64, E.65, L.335, I.343, A.392, R.393, H.396 11 PLIP interactions: 11 interactions with chain G Hydrophobic interactions: G:E.65 Hydrogen bonds: G:I.18, G:I.18, G:P.58, G:G.60, G:T.64, G:T.64, G:E.65 Salt bridges: G:K.63, G:R.393, G:R.393 DAT.4: 15 residues within 4Å: Chain H: H.16, I.17, I.18, P.58, T.59, G.60, V.61, G.62, K.63, T.64, E.65, L.335, I.343, A.392, R.393 14 PLIP interactions: 14 interactions with chain H Hydrophobic interactions: H:E.65 Hydrogen bonds: H:I.18, H:I.18, H:P.58, H:G.60, H:V.61, H:G.62, H:T.64, H:T.64, H:E.65 Salt bridges: H:K.63, H:R.393, H:R.393 pi-Cation interactions: H:H.396 DAT.5: 15 residues within 4Å: Chain M: H.16, I.17, I.18, T.59, G.60, V.61, G.62, K.63, T.64, E.65, L.335, I.343, A.392, R.393, H.396 11 PLIP interactions: 11 interactions with chain M Hydrophobic interactions: M:E.65 Hydrogen bonds: M:I.18, M:I.18, M:P.58, M:G.60, M:T.64, M:T.64, M:E.65 Salt bridges: M:K.63, M:R.393, M:R.393 DAT.6: 15 residues within 4Å: Chain N: H.16, I.17, I.18, P.58, T.59, G.60, V.61, G.62, K.63, T.64, E.65, L.335, I.343, A.392, R.393 14 PLIP interactions: 14 interactions with chain N Hydrophobic interactions: N:E.65 Hydrogen bonds: N:I.18, N:I.18, N:P.58, N:G.60, N:V.61, N:G.62, N:T.64, N:T.64, N:E.65 Salt bridges: N:K.63, N:R.393, N:R.393 pi-Cation interactions: N:H.396

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, J. et al., Crystal structures of the HslVU peptidase-ATPase complex reveal an ATP-dependent proteolysis mechanism. Structure (2001)

Release Date

2001-02-21

Peptides

ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU: ABGHMN
ATP-DEPENDENT PROTEASE HSLV: CDEFIJKLOPQR

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

G
E

H
F

M
E

N
F

C
B

D
A

E
D

F
C

I
B

J
A

K
D

L
C

O
B

P
A

Q
D

R
C

ATP-DEPENDENT HSL PROTEASE ATP-BINDING SUBUNIT HSLU

ATP-DEPENDENT PROTEASE HSLV

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