- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
FMN.3: 18 residues within 4Å:- Chain A: D.49, R.67, I.68, V.69, L.70, Y.82, T.83, S.87, R.88, K.89, Q.146, S.147
- Chain B: H.106, Q.111, W.191, R.201, P.218
- Ligands: PLP.4
23 PLIP interactions:15 interactions with chain A, 8 interactions with chain B- Hydrophobic interactions: A:I.68, A:L.70, B:H.106, B:W.191, B:W.191
- Hydrogen bonds: A:I.68, A:I.68, A:L.70, A:Y.82, A:T.83, A:R.88, A:K.89, A:K.89, A:Q.146, A:S.147, B:Q.111
- Salt bridges: A:R.67, A:R.88, A:K.89, B:R.201
- Water bridges: B:R.201, B:R.201, B:P.218
FMN.8: 18 residues within 4Å:- Chain A: H.106, Q.111, W.191, R.201, P.218
- Chain B: D.49, R.67, I.68, V.69, L.70, Y.82, T.83, S.87, R.88, K.89, Q.146, S.147
- Ligands: PLP.9
21 PLIP interactions:14 interactions with chain B, 7 interactions with chain A- Hydrophobic interactions: B:I.68, B:L.70, A:H.106, A:W.191, A:W.191
- Hydrogen bonds: B:I.68, B:I.68, B:L.70, B:Y.82, B:R.88, B:K.89, B:K.89, B:Q.146, B:S.147, A:Q.111
- Salt bridges: B:R.67, B:R.88, B:K.89, A:R.201
- Water bridges: A:R.201, A:R.201
- 4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
PLP.4: 10 residues within 4Å:- Chain A: L.70, K.72, Y.129, R.133, S.137, Q.146
- Chain B: R.197, H.199, P.218
- Ligands: FMN.3
9 PLIP interactions:3 interactions with chain B, 6 interactions with chain A- Hydrophobic interactions: B:R.197
- Hydrogen bonds: B:H.199, A:Y.129, A:Y.129, A:S.137
- Salt bridges: B:R.197, A:K.72, A:R.133
- Water bridges: A:R.133
PLP.5: 5 residues within 4Å:- Chain A: N.84, W.142, S.144, K.145, F.177
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:K.145, A:F.177
- Hydrogen bonds: A:G.86
- Water bridges: A:K.145
- Salt bridges: A:K.145
- pi-Stacking: A:F.177
PLP.9: 10 residues within 4Å:- Chain A: R.197, H.199, P.218
- Chain B: L.70, K.72, Y.129, R.133, S.137, Q.146
- Ligands: FMN.8
8 PLIP interactions:5 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:Y.129, B:S.137, A:H.199
- Water bridges: B:R.133
- Salt bridges: B:K.72, B:R.133, A:R.197
- Hydrophobic interactions: A:R.197
PLP.10: 5 residues within 4Å:- Chain B: N.84, W.142, S.144, K.145, F.177
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:K.145, B:F.177
- Hydrogen bonds: B:G.86
- Water bridges: B:K.145
- Salt bridges: B:K.145
- pi-Stacking: B:F.177
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Safo, M.K. et al., X-ray structure of Escherichia coli pyridoxine 5'-phosphate oxidase complexed with pyridoxal 5'-phosphate at 2.0 A resolution. J.Mol.Biol. (2001)
- Release Date
- 2000-11-29
- Peptides
- PYRIDOXINE 5'-PHOSPHATE OXIDASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 2 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)
- 4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Safo, M.K. et al., X-ray structure of Escherichia coli pyridoxine 5'-phosphate oxidase complexed with pyridoxal 5'-phosphate at 2.0 A resolution. J.Mol.Biol. (2001)
- Release Date
- 2000-11-29
- Peptides
- PYRIDOXINE 5'-PHOSPHATE OXIDASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A