- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-trimer
- Ligands
- 10 x SO4: SULFATE ION(Non-functional Binders)(Non-covalent)
- 3 x CIT: CITRIC ACID(Non-covalent)(Non-functional Binders)
CIT.11: 12 residues within 4Å:- Chain A: N.6, L.58, C.59, S.60, N.97, Y.99
- Chain B: M.2, I.4, H.40, H.62
- Ligands: CIT.12, CIT.13
8 PLIP interactions:4 interactions with chain B, 4 interactions with chain A- Hydrophobic interactions: B:I.4, A:L.58
- Water bridges: B:S.60
- Salt bridges: B:H.40, B:H.62
- Hydrogen bonds: A:N.6, A:S.60, A:N.97
CIT.12: 13 residues within 4Å:- Chain B: I.4, N.6, L.58, C.59, S.60, N.97, Y.99
- Chain C: M.2, I.4, H.40, H.62
- Ligands: CIT.11, CIT.13
10 PLIP interactions:5 interactions with chain B, 5 interactions with chain C- Hydrophobic interactions: B:L.58, C:I.4
- Hydrogen bonds: B:N.6, B:S.60, B:N.97, B:Y.99
- Water bridges: C:S.60, C:S.60
- Salt bridges: C:H.40, C:H.62
CIT.13: 13 residues within 4Å:- Chain A: M.2, I.4, H.40, H.62
- Chain C: I.4, N.6, L.58, C.59, S.60, N.97, Y.99
- Ligands: CIT.11, CIT.12
8 PLIP interactions:4 interactions with chain C, 4 interactions with chain A- Hydrophobic interactions: C:L.58, A:I.4
- Hydrogen bonds: C:N.6, C:S.60, C:N.97
- Water bridges: A:S.60
- Salt bridges: A:H.40, A:H.62
- 3 x YZ9: 7-HYDROXY-2-OXO-CHROMENE-3-CARBOXYLIC ACID ETHYL ESTER(Non-functional Binders)(Non-covalent)
YZ9.14: 10 residues within 4Å:- Chain A: P.1, M.2, K.32, Y.36, H.62, S.63, I.64, V.106
- Chain C: Y.95, N.97
8 PLIP interactions:6 interactions with chain A, 2 interactions with chain C- Hydrophobic interactions: A:H.62, A:I.64, A:V.106
- Hydrogen bonds: A:I.64, C:N.97
- Salt bridges: A:K.32, A:K.32
- pi-Stacking: C:Y.95
YZ9.15: 11 residues within 4Å:- Chain B: Y.95, N.97
- Chain C: P.1, M.2, K.32, Y.36, H.62, S.63, I.64, V.106, F.113
11 PLIP interactions:8 interactions with chain C, 3 interactions with chain B- Hydrophobic interactions: C:H.62, C:I.64, C:V.106, C:F.113
- Hydrogen bonds: C:P.1, C:I.64, B:Y.95, B:N.97
- Salt bridges: C:K.32, C:K.32
- pi-Stacking: B:Y.95
YZ9.16: 11 residues within 4Å:- Chain A: Y.95, N.97
- Chain B: P.1, M.2, K.32, Y.36, H.62, S.63, I.64, V.106, F.113
12 PLIP interactions:4 interactions with chain A, 8 interactions with chain B- Hydrophobic interactions: A:Y.95, B:Y.36, B:H.62, B:V.106, B:F.113
- Hydrogen bonds: A:Y.95, A:N.97, B:P.1, B:I.64
- pi-Stacking: A:Y.95
- Salt bridges: B:K.32, B:K.32
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Orita, M. et al., Coumarin and chromen-4-one analogues as tautomerase inhibitors of macrophage migration inhibitory factor: discovery and X-ray crystallography. J.Med.Chem. (2001)
- Release Date
- 2001-02-21
- Peptides
- MACROPHAGE MIGRATION INHIBITORY FACTOR: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-trimer
- Ligands
- 10 x SO4: SULFATE ION(Non-functional Binders)(Non-covalent)
- 3 x CIT: CITRIC ACID(Non-covalent)(Non-functional Binders)
- 3 x YZ9: 7-HYDROXY-2-OXO-CHROMENE-3-CARBOXYLIC ACID ETHYL ESTER(Non-functional Binders)(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Orita, M. et al., Coumarin and chromen-4-one analogues as tautomerase inhibitors of macrophage migration inhibitory factor: discovery and X-ray crystallography. J.Med.Chem. (2001)
- Release Date
- 2001-02-21
- Peptides
- MACROPHAGE MIGRATION INHIBITORY FACTOR: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
C