SMTL ID : 1gun.1 (1 other biounit)

MopII from Clostridium pasteurianum complexed with molybdate (partial)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

homo-hexamer

Ligands

8 x MOO: MOLYBDATE ION(Non-covalent)

MOO.1: 8 residues within 4Å: Chain A: I.39, S.40, S.43 Chain E: S.4, A.5, R.6, K.60, S.61 8 PLIP interactions: 6 interactions with chain E, 2 interactions with chain A Hydrogen bonds: E:S.4, E:R.6, E:K.60, E:K.60, E:S.61, E:T.62, A:S.40, A:S.43 MOO.2: 9 residues within 4Å: Chain A: V.20, V.21, T.22 Chain B: V.20, V.21, T.22 Chain C: V.20, V.21, T.22 10 PLIP interactions: 3 interactions with chain A, 4 interactions with chain B, 3 interactions with chain C Hydrogen bonds: A:V.20, A:V.21, A:T.22, B:V.20, B:V.21, B:T.22, B:T.22, C:V.20, C:V.21, C:T.22 MOO.4: 8 residues within 4Å: Chain B: I.39, S.40, S.43 Chain D: S.4, A.5, R.6, K.60, S.61 7 PLIP interactions: 3 interactions with chain B, 4 interactions with chain D Hydrogen bonds: B:S.40, B:S.40, B:S.43, D:R.6, D:K.60, D:K.60, D:S.61 MOO.5: 8 residues within 4Å: Chain C: I.39, S.40, S.43 Chain F: S.4, A.5, R.6, K.60, S.61 7 PLIP interactions: 2 interactions with chain C, 5 interactions with chain F Hydrogen bonds: C:S.40, C:S.43, F:R.6, F:K.60, F:K.60, F:S.61, F:S.61 MOO.6: 8 residues within 4Å: Chain B: S.4, A.5, R.6, K.60, S.61 Chain D: I.39, S.40, S.43 8 PLIP interactions: 6 interactions with chain B, 2 interactions with chain D Hydrogen bonds: B:S.4, B:R.6, B:K.60, B:K.60, B:S.61, B:T.62, D:S.40, D:S.43 MOO.7: 9 residues within 4Å: Chain D: V.20, V.21, T.22 Chain E: V.20, V.21, T.22 Chain F: V.20, V.21, T.22 10 PLIP interactions: 3 interactions with chain F, 3 interactions with chain D, 4 interactions with chain E Hydrogen bonds: F:V.20, F:V.21, F:T.22, D:V.20, D:V.21, D:T.22, E:V.20, E:V.21, E:T.22, E:T.22 MOO.9: 8 residues within 4Å: Chain A: S.4, A.5, R.6, K.60, S.61 Chain E: I.39, S.40, S.43 7 PLIP interactions: 4 interactions with chain A, 3 interactions with chain E Hydrogen bonds: A:R.6, A:K.60, A:K.60, A:S.61, E:S.40, E:S.40, E:S.43 MOO.10: 8 residues within 4Å: Chain C: S.4, A.5, R.6, K.60, S.61 Chain F: I.39, S.40, S.43 7 PLIP interactions: 5 interactions with chain C, 2 interactions with chain F Hydrogen bonds: C:R.6, C:K.60, C:K.60, C:S.61, C:S.61, F:S.40, F:S.43

2 x CA: CALCIUM ION(Non-covalent)

CA.3: 4 residues within 4Å: Chain D: D.63 Chain E: D.63 Chain F: D.63 Ligands: CA.8 5 PLIP interactions: 1 interactions with chain F, 4 Ligand-Water interactions Metal complexes: F:D.63, H2O.2, H2O.2, H2O.5, H2O.6 CA.8: 4 residues within 4Å: Chain A: D.63 Chain B: D.63 Chain C: D.63 Ligands: CA.3 5 PLIP interactions: 1 interactions with chain C, 4 Ligand-Water interactions Metal complexes: C:D.63, H2O.2, H2O.3, H2O.5, H2O.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schuettelkopf, A.W. et al., Passive Acquisition of Ligand by the Mopii Molbindin from Clostridium Pasteurianum: Structures of Apo and Oxyanion-Bound Forms. J.Biol.Chem. (2002)

Release Date

2002-02-08

Peptides

MOLYBDATE BINDING PROTEIN II: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
A

E
B

F
C

MOLYBDATE BINDING PROTEIN II

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