SMTL ID : 1gx0.1 (1 other biounit)

ALPHA-,1,3 GALACTOSYLTRANSFERASE - BETA-D-GALACTOSE COMPLEX

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.1: 16 residues within 4Å: Chain A: F.55, A.56, V.57, Y.60, W.116, I.119, S.120, R.123, D.146, V.147, D.148, K.280, Y.282, V.285, R.286 Ligands: MN.2 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:W.116, A:I.119 Hydrogen bonds: A:F.55, A:V.57, A:V.57, A:Y.60, A:V.147, A:D.148, A:D.148, A:Y.282 Water bridges: A:F.55, A:E.238, A:K.280, A:K.280, A:K.280, A:K.280, A:R.286, A:R.286 Salt bridges: A:K.280, A:K.280, A:R.286, A:R.286 pi-Stacking: A:Y.60

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 4 residues within 4Å: Chain A: D.146, D.148, K.280 Ligands: UDP.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.146, A:D.148, A:D.148, H2O.10

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 4 residues within 4Å: Chain A: H.63, E.67, Q.278, E.281 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:H.63, A:Q.278, A:E.281

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boix, E. et al., Structural Basis of Ordered Binding of Donor and Acceptor Substrates to the Retaining Glycosyltransferase, Alpha -1,3 Galactosyltransferase. J.Biol.Chem. (2002)

Release Date

2003-03-20

Peptides

N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE

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