SMTL ID : 1k4v.2 (1 other biounit)

1.53 A Crystal Structure of the Beta-Galactoside-alpha-1,3-galactosyltransferase in Complex with UDP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.53 Å

Oligo State

monomer

Ligands

1 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: D.146, D.148, K.280 Ligands: UDP.2 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.146, A:D.148, A:D.148, H2O.15

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.2: 15 residues within 4Å: Chain A: F.55, A.56, V.57, Y.60, W.116, I.119, S.120, R.123, D.146, V.147, D.148, K.280, Y.282, R.286 Ligands: MN.1 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:W.116, A:I.119 Hydrogen bonds: A:F.55, A:V.57, A:V.57, A:Y.60, A:Y.60, A:V.147, A:D.148, A:D.148 Water bridges: A:S.120, A:R.123, A:K.280, A:K.280, A:K.280, A:K.280, A:R.286, A:R.286 Salt bridges: A:K.280, A:K.280, A:R.286, A:R.286 pi-Stacking: A:Y.60

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: H.63, Y.64, E.67, Q.278, E.281 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:H.63, A:Q.278, A:Q.278 Water bridges: A:E.67, A:E.281

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Boix, E. et al., Structure of UDP complex of UDP-galactose:beta-galactoside-alpha -1,3-galactosyltransferase at 1.53-A resolution reveals a conformational change in the catalytically important C terminus. J.Biol.Chem. (2001)

Release Date

2002-04-10

Peptides

N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

N-ACETYLLACTOSAMINIDE ALPHA-1,3-GALACTOSYLTRANSFERASE

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