SMTL ID : 1hg4.1 (1 other biounit)

Ultraspiracle ligand binding domain from Drosophila melanogaster

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-trimer

Ligands

3 x LPP: 2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE(Non-covalent)

LPP.1: 18 residues within 4Å: Chain A: V.41, Q.42, Y.45, V.49, V.56, W.89, V.97, L.135, L.137, Y.143, S.147, A.148, K.150, A.151, V.153, C.243, L.247, F.250 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:V.41, A:Y.45, A:V.49, A:V.56, A:W.89, A:V.97, A:L.137, A:Y.143, A:A.151, A:L.247, A:L.247, A:F.250 Hydrogen bonds: A:Q.42 Salt bridges: A:K.150 LPP.2: 18 residues within 4Å: Chain B: V.41, Q.42, Y.45, V.49, L.52, W.89, I.90, V.97, L.135, L.137, Y.143, S.147, K.150, A.151, V.153, C.243, L.247, F.250 18 PLIP interactions: 18 interactions with chain B Hydrophobic interactions: B:V.41, B:V.49, B:L.52, B:W.89, B:I.90, B:V.97, B:L.135, B:L.137, B:Y.143, B:A.151, B:V.153, B:L.247, B:F.250, B:F.250 Hydrogen bonds: B:Q.42, B:Q.42 Salt bridges: B:K.150, B:K.150 LPP.3: 21 residues within 4Å: Chain C: V.41, Q.42, Y.45, V.49, L.52, V.56, W.89, I.90, L.93, L.135, L.137, Y.143, S.147, A.148, K.150, A.151, V.153, H.246, L.247, F.250, I.252 17 PLIP interactions: 17 interactions with chain C Hydrophobic interactions: C:Y.45, C:V.49, C:L.52, C:V.56, C:W.89, C:I.90, C:L.93, C:L.137, C:Y.143, C:Y.143, C:A.151, C:V.153, C:H.246, C:L.247, C:L.247, C:I.252 Hydrogen bonds: C:Q.42

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clayton, G.M. et al., The Structure of the Ultraspiracle Ligand-Binding Domain Reveals a Nuclear Receptor Locked in an Inactive Conformation. Proc.Natl.Acad.Sci.USA (2001)

Release Date

2001-02-23

Peptides

ULTRASPIRACLE: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
D

ULTRASPIRACLE

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