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SMTL ID : 1hg4.2
(1 other biounit)
Ultraspiracle ligand binding domain from Drosophila melanogaster
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 2.40 Å
Oligo State
homo-trimer
Ligands
3 x
LPP
:
2-(HEXADECANOYLOXY)-1-[(PHOSPHONOOXY)METHYL]ETHYL HEXADECANOATE
(Non-covalent)
LPP.1:
19 residues within 4Å:
Chain A:
T.40
,
V.41
,
Q.42
,
Y.45
,
V.49
,
W.89
,
I.90
,
V.97
,
L.135
,
Y.143
,
S.147
,
K.150
,
A.151
,
V.153
,
F.157
,
C.243
,
H.246
,
L.247
,
F.250
12
PLIP interactions
:
12 interactions with chain A
Hydrophobic interactions:
A:V.41
,
A:V.49
,
A:W.89
,
A:I.90
,
A:V.97
,
A:L.135
,
A:Y.143
,
A:Y.143
,
A:Y.143
,
A:F.157
,
A:F.250
Hydrogen bonds:
A:Q.42
LPP.2:
20 residues within 4Å:
Chain B:
V.41
,
Q.42
,
Y.45
,
V.49
,
L.52
,
V.56
,
Q.59
,
W.89
,
L.93
,
V.97
,
L.135
,
L.137
,
Y.143
,
S.147
,
K.150
,
A.151
,
V.153
,
C.243
,
L.247
,
F.250
17
PLIP interactions
:
17 interactions with chain B
Hydrophobic interactions:
B:V.49
,
B:L.52
,
B:V.56
,
B:W.89
,
B:L.93
,
B:V.97
,
B:L.135
,
B:L.137
,
B:Y.143
,
B:Y.143
,
B:A.151
,
B:V.153
,
B:V.153
,
B:L.247
,
B:F.250
Hydrogen bonds:
B:Q.42
,
B:Q.42
LPP.3:
16 residues within 4Å:
Chain C:
V.41
,
Q.42
,
Y.45
,
V.49
,
V.56
,
W.89
,
L.93
,
L.135
,
Y.143
,
S.147
,
K.150
,
A.151
,
C.243
,
H.246
,
L.247
,
F.250
12
PLIP interactions
:
12 interactions with chain C
Hydrophobic interactions:
C:Y.45
,
C:V.49
,
C:V.56
,
C:W.89
,
C:L.93
,
C:Y.143
,
C:H.246
,
C:L.247
,
C:L.247
,
C:F.250
,
C:F.250
Hydrogen bonds:
C:Q.42
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Clayton, G.M. et al., The Structure of the Ultraspiracle Ligand-Binding Domain Reveals a Nuclear Receptor Locked in an Inactive Conformation. Proc.Natl.Acad.Sci.USA (2001)
Release Date
2001-02-23
Peptides
ULTRASPIRACLE:
A
B
C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
B
B
E
C
F
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