SMTL ID : 1hnu.2 (1 other biounit)

CRYSTAL STRUCTURE OF PEROXISOMAL DELTA3-DELTA2-ENOYL-COA ISOMERASE FROM SACCHAROMYCES CEREVISIAE

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-trimer

Ligands

6 x REO: PERRHENATE(Non-covalent)

REO.1: 7 residues within 4Å: Chain A: L.167, L.236, K.237, N.239, H.240 Chain B: T.171, Y.175 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:L.236, A:N.239, A:N.239, A:H.240, B:Y.175 REO.2: 7 residues within 4Å: Chain A: F.72, F.97, G.125, L.126, F.150, L.153, E.158 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.126, A:E.158 Water bridges: A:A.70 REO.5: 7 residues within 4Å: Chain B: L.167, L.236, K.237, N.239, H.240 Chain C: T.171, Y.175 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:L.236, B:N.239, B:N.239, B:H.240, C:Y.175 REO.6: 7 residues within 4Å: Chain B: F.72, F.97, G.125, L.126, F.150, L.153, E.158 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:L.126, B:E.158 Water bridges: B:A.70 REO.9: 7 residues within 4Å: Chain A: T.171, Y.175 Chain C: L.167, L.236, K.237, N.239, H.240 5 PLIP interactions: 4 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:L.236, C:N.239, C:N.239, C:H.240, A:Y.175 REO.10: 7 residues within 4Å: Chain C: F.72, F.97, G.125, L.126, F.150, L.153, E.158 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:L.126, C:E.158 Water bridges: C:A.70

6 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 6 residues within 4Å: Chain A: A.132, L.133, C.134, K.168, K.237, F.244 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:K.168, A:K.168 Water bridges: A:D.135, B:T.171 EDO.4: 5 residues within 4Å: Chain A: R.64, N.141, K.143, P.202, S.203 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:R.64, A:R.64, A:N.141, A:K.143, A:S.203 EDO.7: 6 residues within 4Å: Chain B: A.132, L.133, C.134, K.168, K.237, F.244 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:K.168, B:K.168 Water bridges: B:D.135, C:T.171 EDO.8: 5 residues within 4Å: Chain B: R.64, N.141, K.143, P.202, S.203 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:R.64, B:R.64, B:N.141, B:K.143, B:S.203 EDO.11: 6 residues within 4Å: Chain C: A.132, L.133, C.134, K.168, K.237, F.244 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain C Water bridges: A:T.171, C:D.135 Hydrogen bonds: C:K.168, C:K.168 EDO.12: 5 residues within 4Å: Chain C: R.64, N.141, K.143, P.202, S.203 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:R.64, C:R.64, C:N.141, C:K.143, C:S.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mursula, A.M. et al., The crystal structure of delta(3)-delta(2)-enoyl-CoA isomerase. J.Mol.Biol. (2001)

Release Date

2001-06-20

Peptides

D3,D2-ENOYL COA ISOMERASE ECI1: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D3,D2-ENOYL COA ISOMERASE ECI1

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