SMTL ID : 1hrs.1

A CRYSTALLOGRAPHIC STUDY OF HAEM BINDING TO FERRITIN

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-24-mer

Ligands

48 x CD: CADMIUM ION(Non-covalent)

CD.1: 2 residues within 4Å: Chain A: Q.82 Chain V: D.80 Ligand excluded by PLIP CD.2: 8 residues within 4Å: Chain A: C.126, D.127 Chain E: C.126, D.127 Chain I: C.126, D.127 Ligands: CD.14, CD.26 Ligand excluded by PLIP CD.4: 2 residues within 4Å: Chain B: Q.82 Chain W: D.80 Ligand excluded by PLIP CD.5: 8 residues within 4Å: Chain B: C.126, D.127 Chain G: C.126, D.127 Chain L: C.126, D.127 Ligands: CD.20, CD.35 Ligand excluded by PLIP CD.7: 2 residues within 4Å: Chain C: Q.82 Chain X: D.80 Ligand excluded by PLIP CD.8: 8 residues within 4Å: Chain C: C.126, D.127 Chain H: C.126, D.127 Chain J: C.126, D.127 Ligands: CD.23, CD.29 Ligand excluded by PLIP CD.10: 2 residues within 4Å: Chain D: Q.82 Chain U: D.80 Ligand excluded by PLIP CD.11: 8 residues within 4Å: Chain D: C.126, D.127 Chain F: C.126, D.127 Chain K: C.126, D.127 Ligands: CD.17, CD.32 Ligand excluded by PLIP CD.13: 2 residues within 4Å: Chain E: Q.82 Chain Q: D.80 Ligand excluded by PLIP CD.14: 8 residues within 4Å: Chain A: C.126, D.127 Chain E: C.126, D.127 Chain I: C.126, D.127 Ligands: CD.2, CD.26 Ligand excluded by PLIP CD.16: 2 residues within 4Å: Chain F: Q.82 Chain T: D.80 Ligand excluded by PLIP CD.17: 8 residues within 4Å: Chain D: C.126, D.127 Chain F: C.126, D.127 Chain K: C.126, D.127 Ligands: CD.11, CD.32 Ligand excluded by PLIP CD.19: 2 residues within 4Å: Chain G: Q.82 Chain S: D.80 Ligand excluded by PLIP CD.20: 8 residues within 4Å: Chain B: C.126, D.127 Chain G: C.126, D.127 Chain L: C.126, D.127 Ligands: CD.5, CD.35 Ligand excluded by PLIP CD.22: 2 residues within 4Å: Chain H: Q.82 Chain R: D.80 Ligand excluded by PLIP CD.23: 8 residues within 4Å: Chain C: C.126, D.127 Chain H: C.126, D.127 Chain J: C.126, D.127 Ligands: CD.8, CD.29 Ligand excluded by PLIP CD.25: 2 residues within 4Å: Chain I: Q.82 Chain P: D.80 Ligand excluded by PLIP CD.26: 8 residues within 4Å: Chain A: C.126, D.127 Chain E: C.126, D.127 Chain I: C.126, D.127 Ligands: CD.2, CD.14 Ligand excluded by PLIP CD.28: 2 residues within 4Å: Chain J: Q.82 Chain M: D.80 Ligand excluded by PLIP CD.29: 8 residues within 4Å: Chain C: C.126, D.127 Chain H: C.126, D.127 Chain J: C.126, D.127 Ligands: CD.8, CD.23 Ligand excluded by PLIP CD.31: 2 residues within 4Å: Chain K: Q.82 Chain N: D.80 Ligand excluded by PLIP CD.32: 8 residues within 4Å: Chain D: C.126, D.127 Chain F: C.126, D.127 Chain K: C.126, D.127 Ligands: CD.11, CD.17 Ligand excluded by PLIP CD.34: 2 residues within 4Å: Chain L: Q.82 Chain O: D.80 Ligand excluded by PLIP CD.35: 8 residues within 4Å: Chain B: C.126, D.127 Chain G: C.126, D.127 Chain L: C.126, D.127 Ligands: CD.5, CD.20 Ligand excluded by PLIP CD.37: 2 residues within 4Å: Chain J: D.80 Chain M: Q.82 Ligand excluded by PLIP CD.38: 8 residues within 4Å: Chain M: C.126, D.127 Chain Q: C.126, D.127 Chain U: C.126, D.127 Ligands: CD.50, CD.62 Ligand excluded by PLIP CD.40: 2 residues within 4Å: Chain K: D.80 Chain N: Q.82 Ligand excluded by PLIP CD.41: 8 residues within 4Å: Chain N: C.126, D.127 Chain S: C.126, D.127 Chain X: C.126, D.127 Ligands: CD.56, CD.71 Ligand excluded by PLIP CD.43: 2 residues within 4Å: Chain L: D.80 Chain O: Q.82 Ligand excluded by PLIP CD.44: 8 residues within 4Å: Chain O: C.126, D.127 Chain T: C.126, D.127 Chain V: C.126, D.127 Ligands: CD.59, CD.65 Ligand excluded by PLIP CD.46: 2 residues within 4Å: Chain I: D.80 Chain P: Q.82 Ligand excluded by PLIP CD.47: 8 residues within 4Å: Chain P: C.126, D.127 Chain R: C.126, D.127 Chain W: C.126, D.127 Ligands: CD.53, CD.68 Ligand excluded by PLIP CD.49: 2 residues within 4Å: Chain E: D.80 Chain Q: Q.82 Ligand excluded by PLIP CD.50: 8 residues within 4Å: Chain M: C.126, D.127 Chain Q: C.126, D.127 Chain U: C.126, D.127 Ligands: CD.38, CD.62 Ligand excluded by PLIP CD.52: 2 residues within 4Å: Chain H: D.80 Chain R: Q.82 Ligand excluded by PLIP CD.53: 8 residues within 4Å: Chain P: C.126, D.127 Chain R: C.126, D.127 Chain W: C.126, D.127 Ligands: CD.47, CD.68 Ligand excluded by PLIP CD.55: 2 residues within 4Å: Chain G: D.80 Chain S: Q.82 Ligand excluded by PLIP CD.56: 8 residues within 4Å: Chain N: C.126, D.127 Chain S: C.126, D.127 Chain X: C.126, D.127 Ligands: CD.41, CD.71 Ligand excluded by PLIP CD.58: 2 residues within 4Å: Chain F: D.80 Chain T: Q.82 Ligand excluded by PLIP CD.59: 8 residues within 4Å: Chain O: C.126, D.127 Chain T: C.126, D.127 Chain V: C.126, D.127 Ligands: CD.44, CD.65 Ligand excluded by PLIP CD.61: 2 residues within 4Å: Chain D: D.80 Chain U: Q.82 Ligand excluded by PLIP CD.62: 8 residues within 4Å: Chain M: C.126, D.127 Chain Q: C.126, D.127 Chain U: C.126, D.127 Ligands: CD.38, CD.50 Ligand excluded by PLIP CD.64: 2 residues within 4Å: Chain A: D.80 Chain V: Q.82 Ligand excluded by PLIP CD.65: 8 residues within 4Å: Chain O: C.126, D.127 Chain T: C.126, D.127 Chain V: C.126, D.127 Ligands: CD.44, CD.59 Ligand excluded by PLIP CD.67: 2 residues within 4Å: Chain B: D.80 Chain W: Q.82 Ligand excluded by PLIP CD.68: 8 residues within 4Å: Chain P: C.126, D.127 Chain R: C.126, D.127 Chain W: C.126, D.127 Ligands: CD.47, CD.53 Ligand excluded by PLIP CD.70: 2 residues within 4Å: Chain C: D.80 Chain X: Q.82 Ligand excluded by PLIP CD.71: 8 residues within 4Å: Chain N: C.126, D.127 Chain S: C.126, D.127 Chain X: C.126, D.127 Ligands: CD.41, CD.56 Ligand excluded by PLIP

24 x PP9: PROTOPORPHYRIN IX(Non-covalent)

PP9.3: 21 residues within 4Å: Chain A: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain V: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.66 23 PLIP interactions: 13 interactions with chain A, 10 interactions with chain V Hydrophobic interactions: A:L.24, A:Y.28, A:Y.28, A:L.31, A:L.31, A:A.55, A:E.56, A:R.59, V:L.24, V:Y.28, V:Y.28, V:L.31, V:A.55, V:E.56 Hydrogen bonds: A:S.27, A:E.56, A:R.59, V:S.27, V:E.56 Salt bridges: A:R.52, A:R.59, V:R.52, V:R.59 PP9.6: 21 residues within 4Å: Chain B: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain W: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.69 23 PLIP interactions: 13 interactions with chain B, 10 interactions with chain W Hydrophobic interactions: B:L.24, B:Y.28, B:Y.28, B:L.31, B:L.31, B:A.55, B:E.56, B:R.59, W:L.24, W:Y.28, W:Y.28, W:L.31, W:A.55, W:E.56 Hydrogen bonds: B:S.27, B:E.56, B:R.59, W:S.27, W:E.56 Salt bridges: B:R.52, B:R.59, W:R.52, W:R.59 PP9.9: 21 residues within 4Å: Chain C: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain X: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.72 23 PLIP interactions: 12 interactions with chain C, 11 interactions with chain X Hydrophobic interactions: C:L.24, C:Y.28, C:Y.28, C:L.31, C:L.31, C:A.55, C:E.56, C:R.59, X:L.24, X:Y.28, X:Y.28, X:L.31, X:A.55, X:E.56 Hydrogen bonds: C:S.27, C:R.59, X:S.27, X:E.56, X:E.56 Salt bridges: C:R.52, C:R.59, X:R.52, X:R.59 PP9.12: 21 residues within 4Å: Chain D: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain U: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.63 23 PLIP interactions: 12 interactions with chain D, 11 interactions with chain U Hydrophobic interactions: D:L.24, D:Y.28, D:Y.28, D:L.31, D:L.31, D:A.55, D:E.56, D:R.59, U:L.24, U:Y.28, U:Y.28, U:L.31, U:A.55, U:E.56 Hydrogen bonds: D:S.27, D:R.59, U:S.27, U:E.56, U:E.56 Salt bridges: D:R.52, D:R.59, U:R.52, U:R.59 PP9.15: 21 residues within 4Å: Chain E: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain Q: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.51 23 PLIP interactions: 12 interactions with chain E, 11 interactions with chain Q Hydrophobic interactions: E:L.24, E:Y.28, E:Y.28, E:L.31, E:L.31, E:A.55, E:E.56, E:R.59, Q:L.24, Q:Y.28, Q:Y.28, Q:L.31, Q:A.55, Q:E.56 Hydrogen bonds: E:S.27, E:R.59, Q:S.27, Q:E.56, Q:E.56 Salt bridges: E:R.52, E:R.59, Q:R.52, Q:R.59 PP9.18: 21 residues within 4Å: Chain F: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain T: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.60 23 PLIP interactions: 13 interactions with chain F, 10 interactions with chain T Hydrophobic interactions: F:L.24, F:Y.28, F:Y.28, F:L.31, F:L.31, F:A.55, F:E.56, F:R.59, T:L.24, T:Y.28, T:Y.28, T:L.31, T:A.55, T:E.56 Hydrogen bonds: F:S.27, F:E.56, F:R.59, T:S.27, T:E.56 Salt bridges: F:R.52, F:R.59, T:R.52, T:R.59 PP9.21: 21 residues within 4Å: Chain G: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain S: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.57 23 PLIP interactions: 12 interactions with chain G, 11 interactions with chain S Hydrophobic interactions: G:L.24, G:Y.28, G:Y.28, G:L.31, G:L.31, G:A.55, G:E.56, G:R.59, S:L.24, S:Y.28, S:Y.28, S:L.31, S:A.55, S:E.56 Hydrogen bonds: G:S.27, G:R.59, S:S.27, S:E.56, S:E.56 Salt bridges: G:R.52, G:R.59, S:R.52, S:R.59 PP9.24: 21 residues within 4Å: Chain H: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain R: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.54 23 PLIP interactions: 10 interactions with chain R, 13 interactions with chain H Hydrophobic interactions: R:L.24, R:Y.28, R:Y.28, R:L.31, R:A.55, R:E.56, H:L.24, H:Y.28, H:Y.28, H:L.31, H:L.31, H:A.55, H:E.56, H:R.59 Hydrogen bonds: R:S.27, R:E.56, H:S.27, H:E.56, H:R.59 Salt bridges: R:R.52, R:R.59, H:R.52, H:R.59 PP9.27: 21 residues within 4Å: Chain I: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain P: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.48 23 PLIP interactions: 12 interactions with chain I, 11 interactions with chain P Hydrophobic interactions: I:L.24, I:Y.28, I:Y.28, I:L.31, I:L.31, I:A.55, I:E.56, I:R.59, P:L.24, P:Y.28, P:Y.28, P:L.31, P:A.55, P:E.56 Hydrogen bonds: I:S.27, I:R.59, P:S.27, P:E.56, P:E.56 Salt bridges: I:R.52, I:R.59, P:R.52, P:R.59 PP9.30: 21 residues within 4Å: Chain J: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain M: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.39 23 PLIP interactions: 13 interactions with chain J, 10 interactions with chain M Hydrophobic interactions: J:L.24, J:Y.28, J:Y.28, J:L.31, J:L.31, J:A.55, J:E.56, J:R.59, M:L.24, M:Y.28, M:Y.28, M:L.31, M:A.55, M:E.56 Hydrogen bonds: J:S.27, J:E.56, J:R.59, M:S.27, M:E.56 Salt bridges: J:R.52, J:R.59, M:R.52, M:R.59 PP9.33: 21 residues within 4Å: Chain K: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain N: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.42 23 PLIP interactions: 10 interactions with chain N, 13 interactions with chain K Hydrophobic interactions: N:L.24, N:Y.28, N:Y.28, N:L.31, N:A.55, N:E.56, K:L.24, K:Y.28, K:Y.28, K:L.31, K:L.31, K:A.55, K:E.56, K:R.59 Hydrogen bonds: N:S.27, N:E.56, K:S.27, K:E.56, K:R.59 Salt bridges: N:R.52, N:R.59, K:R.52, K:R.59 PP9.36: 21 residues within 4Å: Chain L: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Chain O: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Ligands: PP9.45 23 PLIP interactions: 12 interactions with chain L, 11 interactions with chain O Hydrophobic interactions: L:L.24, L:Y.28, L:Y.28, L:L.31, L:L.31, L:A.55, L:E.56, L:R.59, O:L.24, O:Y.28, O:Y.28, O:L.31, O:A.55, O:E.56 Hydrogen bonds: L:S.27, L:R.59, O:S.27, O:E.56, O:E.56 Salt bridges: L:R.52, L:R.59, O:R.52, O:R.59 PP9.39: 21 residues within 4Å: Chain J: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain M: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.30 23 PLIP interactions: 11 interactions with chain J, 12 interactions with chain M Hydrophobic interactions: J:L.24, J:Y.28, J:Y.28, J:L.31, J:A.55, J:E.56, M:L.24, M:Y.28, M:Y.28, M:L.31, M:L.31, M:A.55, M:E.56, M:R.59 Hydrogen bonds: J:S.27, J:E.56, J:E.56, M:S.27, M:R.59 Salt bridges: J:R.52, J:R.59, M:R.52, M:R.59 PP9.42: 21 residues within 4Å: Chain K: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain N: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.33 23 PLIP interactions: 12 interactions with chain N, 11 interactions with chain K Hydrophobic interactions: N:L.24, N:Y.28, N:Y.28, N:L.31, N:L.31, N:A.55, N:E.56, N:R.59, K:L.24, K:Y.28, K:Y.28, K:L.31, K:A.55, K:E.56 Hydrogen bonds: N:S.27, N:R.59, K:S.27, K:E.56, K:E.56 Salt bridges: N:R.52, N:R.59, K:R.52, K:R.59 PP9.45: 21 residues within 4Å: Chain L: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain O: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.36 23 PLIP interactions: 10 interactions with chain L, 13 interactions with chain O Hydrophobic interactions: L:L.24, L:Y.28, L:Y.28, L:L.31, L:A.55, L:E.56, O:L.24, O:Y.28, O:Y.28, O:L.31, O:L.31, O:A.55, O:E.56, O:R.59 Hydrogen bonds: L:S.27, L:E.56, O:S.27, O:E.56, O:R.59 Salt bridges: L:R.52, L:R.59, O:R.52, O:R.59 PP9.48: 21 residues within 4Å: Chain I: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain P: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.27 23 PLIP interactions: 10 interactions with chain I, 13 interactions with chain P Hydrophobic interactions: I:L.24, I:Y.28, I:Y.28, I:L.31, I:A.55, I:E.56, P:L.24, P:Y.28, P:Y.28, P:L.31, P:L.31, P:A.55, P:E.56, P:R.59 Hydrogen bonds: I:S.27, I:E.56, P:S.27, P:E.56, P:R.59 Salt bridges: I:R.52, I:R.59, P:R.52, P:R.59 PP9.51: 21 residues within 4Å: Chain E: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain Q: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.15 23 PLIP interactions: 13 interactions with chain Q, 10 interactions with chain E Hydrophobic interactions: Q:L.24, Q:Y.28, Q:Y.28, Q:L.31, Q:L.31, Q:A.55, Q:E.56, Q:R.59, E:L.24, E:Y.28, E:Y.28, E:L.31, E:A.55, E:E.56 Hydrogen bonds: Q:S.27, Q:E.56, Q:R.59, E:S.27, E:E.56 Salt bridges: Q:R.52, Q:R.59, E:R.52, E:R.59 PP9.54: 21 residues within 4Å: Chain H: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain R: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.24 23 PLIP interactions: 11 interactions with chain H, 12 interactions with chain R Hydrophobic interactions: H:L.24, H:Y.28, H:Y.28, H:L.31, H:A.55, H:E.56, R:L.24, R:Y.28, R:Y.28, R:L.31, R:L.31, R:A.55, R:E.56, R:R.59 Hydrogen bonds: H:S.27, H:E.56, H:E.56, R:S.27, R:R.59 Salt bridges: H:R.52, H:R.59, R:R.52, R:R.59 PP9.57: 21 residues within 4Å: Chain G: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain S: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.21 23 PLIP interactions: 13 interactions with chain S, 10 interactions with chain G Hydrophobic interactions: S:L.24, S:Y.28, S:Y.28, S:L.31, S:L.31, S:A.55, S:E.56, S:R.59, G:L.24, G:Y.28, G:Y.28, G:L.31, G:A.55, G:E.56 Hydrogen bonds: S:S.27, S:E.56, S:R.59, G:S.27, G:E.56 Salt bridges: S:R.52, S:R.59, G:R.52, G:R.59 PP9.60: 21 residues within 4Å: Chain F: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain T: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.18 23 PLIP interactions: 12 interactions with chain T, 11 interactions with chain F Hydrophobic interactions: T:L.24, T:Y.28, T:Y.28, T:L.31, T:L.31, T:A.55, T:E.56, T:R.59, F:L.24, F:Y.28, F:Y.28, F:L.31, F:A.55, F:E.56 Hydrogen bonds: T:S.27, T:R.59, F:S.27, F:E.56, F:E.56 Salt bridges: T:R.52, T:R.59, F:R.52, F:R.59 PP9.63: 21 residues within 4Å: Chain D: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain U: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.12 23 PLIP interactions: 10 interactions with chain D, 13 interactions with chain U Hydrophobic interactions: D:L.24, D:Y.28, D:Y.28, D:L.31, D:A.55, D:E.56, U:L.24, U:Y.28, U:Y.28, U:L.31, U:L.31, U:A.55, U:E.56, U:R.59 Hydrogen bonds: D:S.27, D:E.56, U:S.27, U:E.56, U:R.59 Salt bridges: D:R.52, D:R.59, U:R.52, U:R.59 PP9.66: 21 residues within 4Å: Chain A: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain V: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.3 23 PLIP interactions: 12 interactions with chain V, 11 interactions with chain A Hydrophobic interactions: V:L.24, V:Y.28, V:Y.28, V:L.31, V:L.31, V:A.55, V:E.56, V:R.59, A:L.24, A:Y.28, A:Y.28, A:L.31, A:A.55, A:E.56 Hydrogen bonds: V:S.27, V:R.59, A:S.27, A:E.56, A:E.56 Salt bridges: V:R.52, V:R.59, A:R.52, A:R.59 PP9.69: 21 residues within 4Å: Chain B: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain W: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.6 23 PLIP interactions: 12 interactions with chain W, 11 interactions with chain B Hydrophobic interactions: W:L.24, W:Y.28, W:Y.28, W:L.31, W:L.31, W:A.55, W:E.56, W:R.59, B:L.24, B:Y.28, B:Y.28, B:L.31, B:A.55, B:E.56 Hydrogen bonds: W:S.27, W:R.59, B:S.27, B:E.56, B:E.56 Salt bridges: W:R.52, W:R.59, B:R.52, B:R.59 PP9.72: 21 residues within 4Å: Chain C: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.63 Chain X: L.24, S.27, Y.28, L.31, R.52, A.55, E.56, R.59, E.60, E.63, L.81 Ligands: PP9.9 23 PLIP interactions: 10 interactions with chain C, 13 interactions with chain X Hydrophobic interactions: C:L.24, C:Y.28, C:Y.28, C:L.31, C:A.55, C:E.56, X:L.24, X:Y.28, X:Y.28, X:L.31, X:L.31, X:A.55, X:E.56, X:R.59 Hydrogen bonds: C:S.27, C:E.56, X:S.27, X:E.56, X:R.59 Salt bridges: C:R.52, C:R.59, X:R.52, X:R.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Precigoux, G. et al., A crystallographic study of haem binding to ferritin. Acta Crystallogr.,Sect.D (1994)

Release Date

1994-05-31

Peptides

APOFERRITIN CO-CRYSTALLIZED WITH SN-PROTOPORPHYRIN IX IN CADMIUM SULFATE: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

M
A

N
A

O
A

P
A

Q
A

R
A

S
A

T
A

U
A

V
A

W
A

X
A

APOFERRITIN CO-CRYSTALLIZED WITH SN-PROTOPORPHYRIN IX IN CADMIUM SULFATE

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