SMTL ID : 1huz.2 (1 other biounit)

CRYSTAL STRUCTURE OF DNA POLYMERASE COMPLEXED WITH DNA AND CR-PCP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x DC- DG- DA- DC- DG- DC- DC- DT: 5'-D(P*CP*GP*AP*CP*GP*CP*CP*T)-3'(Non-covalent)

DC-DG-DA-DC-DG-DC-DC-DT.1: 29 residues within 4Å: Chain A: A.4, G.5, G.6, C.7, G.8, T.9, C.10, G.11 Chain B: V.103, T.104, G.105, I.106, G.107, P.108, S.109, A.110, D.190, D.192, M.236, R.254, D.256, Y.271, F.272, T.273, S.275, D.276, N.279 Ligands: CR.2, MDN.3 Protein-ligand interaction information (PLIP) not available

1 x CR: CHROMIUM ION(Non-covalent)

CR.2: 4 residues within 4Å: Chain B: D.190, D.192 Ligands: DC-DG-DA-DC-DG-DC-DC-DT.1, MDN.3 2 PLIP interactions: 2 interactions with chain B Metal complexes: B:D.190, B:D.192

1 x MDN: METHYLENEDIPHOSPHONIC ACID(Non-covalent)

MDN.3: 10 residues within 4Å: Chain B: R.149, G.179, S.180, R.183, S.188, G.189, D.190, D.192 Ligands: DC-DG-DA-DC-DG-DC-DC-DT.1, CR.2 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:R.149, B:S.180, B:S.180, B:R.183, B:G.189, B:D.190 Water bridges: B:R.183, B:R.183

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Arndt, J.W. et al., Insight into the catalytic mechanism of DNA polymerase beta: structures of intermediate complexes. Biochemistry (2001)

Release Date

2001-04-23

Peptides

DNA POLYMERASE BETA: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
B

DNA POLYMERASE BETA

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