SMTL ID : 1hwn.1

EBULIN COMPLEXED WITH GALACTOSE, TRIGONAL CRYSTAL FORM

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 6 residues within 4Å: Chain B: A.141, Q.174, N.186, N.187, R.189, P.264 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.189

2 x GAL: beta-D-galactopyranose(Non-covalent)

GAL.2: 9 residues within 4Å: Chain B: D.24, V.25, R.26, N.27, G.28, Q.37, W.39, Q.44, N.46 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:D.24, B:N.27, B:N.27, B:Q.37, B:Q.37, B:Q.44, B:N.46 Salt bridges: B:R.115 GAL.3: 9 residues within 4Å: Chain B: D.235, V.236, K.237, E.238, S.239, T.252, N.254, N.256, Q.257 14 PLIP interactions: 14 interactions with chain B Hydrogen bonds: B:D.235, B:D.235, B:V.236, B:V.236, B:E.238, B:E.238, B:E.238, B:S.239, B:T.252, B:T.252, B:T.252, B:N.254, B:N.256, B:Q.257

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pascal, J.M. et al., 2.8-A crystal structure of a nontoxic type-II ribosome-inactivating protein, ebulin l. Proteins (2001)

Release Date

2001-01-24

Peptides

EBULIN: A
EBULIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

EBULIN

EBULIN

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