SMTL ID : 1i9r.1

STRUCTURE OF CD40L IN COMPLEX WITH THE FAB FRAGMENT OF HUMANIZED 5C8 ANTIBODY

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.10 Å

Oligo State

hetero-3-3-3-mer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain D: D.100, D.104, D.106 Chain E: K.53, E.59 2 PLIP interactions: 1 interactions with chain E, 1 interactions with chain D Metal complexes: E:E.59, D:D.106 ZN.2: 5 residues within 4Å: Chain F: D.100, D.104, D.106 Chain G: K.53, E.59 2 PLIP interactions: 2 interactions with chain F Metal complexes: F:D.100, F:D.106 ZN.3: 5 residues within 4Å: Chain H: D.100, D.104, D.106 Chain I: K.53, E.59 3 PLIP interactions: 1 interactions with chain I, 2 interactions with chain H Metal complexes: I:E.59, H:D.100, H:D.106

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Karpusas, M. et al., Structure of CD40 ligand in complex with the Fab fragment of a neutralizing humanized antibody. Structure (2001)

Release Date

2002-03-20

Peptides

CD40 LIGAND: ABC
IMMUNOGLOBULIN H: DFH
IMMUNOGLOBULIN L: EGI

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
H

F
K

H
X

E
L

G
M

I
Y

CD40 LIGAND

IMMUNOGLOBULIN H

IMMUNOGLOBULIN L

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