SMTL ID : 1ifx.1

CRYSTAL STRUCTURE OF NH3-DEPENDENT NAD+ SYNTHETASE FROM BACILLUS SUBTILIS COMPLEXED WITH TWO MOLECULES DEAMIDO-NAD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

2 x DND: NICOTINIC ACID ADENINE DINUCLEOTIDE(Non-covalent)

DND.1: 17 residues within 4Å: Chain A: F.129, N.133, R.137, F.167, F.168, T.169, K.170, D.173, R.251, H.257, K.258 Chain B: Y.32, T.36, Y.144, L.152, L.153, D.177 16 PLIP interactions: 2 interactions with chain B, 14 interactions with chain A Hydrogen bonds: B:Y.32, B:L.152, A:N.133, A:K.170, A:K.170, A:R.251 Hydrophobic interactions: A:F.167 Water bridges: A:N.133, A:R.137, A:R.137, A:H.257 Salt bridges: A:R.137, A:K.258, A:K.258 pi-Stacking: A:H.257, A:H.257 DND.2: 17 residues within 4Å: Chain A: Y.32, T.36, Y.144, L.152, L.153, D.177 Chain B: F.129, N.133, R.137, E.162, F.167, F.168, T.169, K.170, D.173, H.257, K.258 12 PLIP interactions: 9 interactions with chain B, 3 interactions with chain A Hydrogen bonds: B:N.133, B:K.170, A:Y.32, A:L.152 Water bridges: B:N.133, B:R.137, A:Y.144 Salt bridges: B:R.137, B:K.258, B:K.258 pi-Stacking: B:H.257, B:H.257

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Devedjiev, Y. et al., Stabilization of active-site loops in NH3-dependent NAD+ synthetase from Bacillus subtilis. Acta Crystallogr.,Sect.D (2001)

Release Date

2001-06-06

Peptides

NH(3)-DEPENDENT NAD(+) SYNTHETASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

NH(3)-DEPENDENT NAD(+) SYNTHETASE

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