- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 28 x SO4: SULFATE ION(Non-functional Binders)
- 4 x VIB: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM(Non-covalent)
VIB.10: 11 residues within 4Å:- Chain A: W.222, L.224, S.236, T.237, S.238, N.239
- Chain B: Q.116, D.117, H.118, T.119
- Ligands: SO4.5
5 PLIP interactions:3 interactions with chain A, 2 interactions with chain B- Hydrophobic interactions: A:W.222, A:W.222, A:L.224
- Hydrogen bonds: B:Q.116
- Water bridges: B:D.120
VIB.16: 12 residues within 4Å:- Chain A: Q.116, D.117, H.118, T.119
- Chain B: W.222, L.224, S.236, T.237, S.238, N.239
- Ligands: SO4.3, SO4.6
7 PLIP interactions:5 interactions with chain B, 2 interactions with chain A- Hydrophobic interactions: B:W.222, B:W.222, B:L.224, A:Q.116
- Water bridges: B:T.237, B:T.237
- Hydrogen bonds: A:Q.116
VIB.26: 11 residues within 4Å:- Chain C: W.222, L.224, S.236, T.237, S.238, N.239
- Chain D: Q.116, D.117, H.118, T.119
- Ligands: SO4.21
6 PLIP interactions:3 interactions with chain C, 3 interactions with chain D- Hydrophobic interactions: C:W.222, C:W.222, C:L.224
- Hydrogen bonds: D:Q.116, D:D.117
- Water bridges: D:D.120
VIB.32: 12 residues within 4Å:- Chain C: Q.116, D.117, H.118, T.119
- Chain D: W.222, L.224, S.236, T.237, S.238, N.239
- Ligands: SO4.19, SO4.22
8 PLIP interactions:5 interactions with chain D, 3 interactions with chain C- Hydrophobic interactions: D:W.222, D:W.222, D:L.224, C:Q.116
- Water bridges: D:T.237, D:T.237
- Hydrogen bonds: C:Q.116, C:D.117
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Timm, D.E. et al., Crystal structure of thiamin pyrophosphokinase. J.Mol.Biol. (2001)
- Release Date
- 2001-04-25
- Peptides
- thiamin pyrophosphokinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-tetramer
- Ligands
- 28 x SO4: SULFATE ION(Non-functional Binders)
- 4 x VIB: 3-(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-5-(2-HYDROXY-ETHYL)-4-METHYL-THIAZOL-3-IUM(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Timm, D.E. et al., Crystal structure of thiamin pyrophosphokinase. J.Mol.Biol. (2001)
- Release Date
- 2001-04-25
- Peptides
- thiamin pyrophosphokinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B