SMTL ID : 1ikg.1

MICHAELIS COMPLEX OF STREPTOMYCES R61 DD-PEPTIDASE WITH A SPECIFIC PEPTIDOGLYCAN SUBSTRATE FRAGMENT

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x REX: GLYCYL-L-ALPHA-AMINO-EPSILON-PIMELYL-D-ALANYL-D-ALANINE(Non-covalent)

REX.1: 17 residues within 4Å: Chain A: G.61, S.62, F.120, T.123, Y.159, N.161, L.214, W.233, A.237, R.285, H.298, T.299, G.300, T.301, Q.303, S.326, N.327 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:F.120, A:W.233, A:T.301 Hydrogen bonds: A:S.62, A:S.62, A:T.123, A:Y.159, A:Y.159, A:N.161, A:T.299, A:T.299, A:T.301, A:T.301, A:S.326, A:N.327 Water bridges: A:T.123, A:Y.306 Salt bridges: A:K.65, A:R.285, A:H.298

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

McDonough, M.A. et al., Structures of two kinetic intermediates reveal species specificity of penicillin-binding proteins. J.Mol.Biol. (2002)

Release Date

2002-09-11

Peptides

D-ALANYL-D-ALANINE CARBOXYPEPTIDASE: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

D-ALANYL-D-ALANINE CARBOXYPEPTIDASE

Related Entries With Identical Sequence