SMTL ID : 1iql.1

Human coagulation factor Xa in complex with M54476

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 6 residues within 4Å: Chain A: D.56, N.58, Q.61, E.62, E.63, E.66 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.56, A:N.58, A:E.63, A:E.66

1 x XMJ: 4-[[(1E)-2-(4-CHLOROPHENYL)ETHENYL]SULFONYL]-1-[[1-(4-PYRIDINYL)-4-PIPERIDINYL]METHYL]PIPERAZINONE(Non-covalent)

XMJ.2: 18 residues within 4Å: Chain A: E.83, T.84, Y.85, F.162, D.179, A.180, C.181, Q.182, V.203, S.204, W.205, G.206, E.207, G.208, C.209, G.216, I.217, Y.218 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.85, A:F.162, A:A.180, A:V.203 Hydrogen bonds: A:Q.182, A:Q.182, A:G.208 pi-Stacking: A:W.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Matsusue, T. et al., Factor Xa Specific Inhibitor that Induces the Novel Binding Model in Complex with Human Fxa. To be Published

Release Date

2003-09-23

Peptides

coagulation Factor Xa: A
coagulation Factor Xa: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
L

coagulation Factor Xa

coagulation Factor Xa

Related Entries With Identical Sequence