SMTL ID : 4bti.1 (1 other biounit)

factor Xa in complex with the dual thrombin-FXa inhibitor 58.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain B: D.56, N.58, Q.61, E.63, E.66 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:D.56, B:N.58, B:Q.61, B:E.66

1 x 7R9: 5-Chloro-thiophene-2-carboxylic acid [(S)-2-[2-difluoromethoxy-3-(2-oxo-piperidin-1-yl)-benzenesulfonylamino]-3-((S)-3-dimethylamino-pyrrolidin-1-yl)-3-oxo-propyl]-amide(Non-covalent)

7R9.2: 20 residues within 4Å: Chain B: H.42, Q.46, E.83, T.84, Y.85, F.162, D.179, A.180, C.181, Q.182, V.203, S.204, W.205, G.206, E.207, G.208, C.209, G.216, I.217, Y.218 9 PLIP interactions: 9 interactions with chain B Hydrophobic interactions: B:Y.85, B:Y.85, B:F.162, B:W.205 Hydrogen bonds: B:G.206, B:G.208, B:G.208, B:G.208 Water bridges: B:S.185

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Meneyrol, J. et al., 5-Chlorothiophene-2-Carboxylic Acid [(S)-2-[2-Methyl-3-(2-Oxopyrrolidin-1-Yl)Benzenesulfonylamino]-3-(4-Methylpiperazin-1-Yl)-3-Oxopropyl]Amide (Sar107375), a Selective and Potent Orally Active Dual Thrombin and Factor Xa Inhibitor. J.Med.Chem. (2013)

Release Date

2013-12-25

Peptides

COAGULATION FACTOR X HEAVY CHAIN: A
COAGULATION FACTOR X LIGHT CHAIN: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

COAGULATION FACTOR X HEAVY CHAIN

COAGULATION FACTOR X LIGHT CHAIN

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