- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 5 x SO4: SULFATE ION(Non-functional Binders)
- 2 x COA: COENZYME A(Non-covalent)
COA.3: 17 residues within 4Å:- Chain A: A.222, L.247, K.250, R.252, I.253, M.254, G.255, M.256, G.257, H.258, K.262, L.302, R.305, I.307, N.310, D.312
- Ligands: CIT.4
13 PLIP interactions:13 interactions with chain A- Hydrogen bonds: A:R.252, A:I.253, A:I.253, A:G.255, A:M.256, A:M.256, A:N.310
- Water bridges: A:K.262, A:K.262
- Salt bridges: A:K.250, A:K.262, A:K.262, A:R.305
COA.9: 19 residues within 4Å:- Chain A: R.354, L.355
- Chain B: P.217, R.218, H.219, A.222, R.252, I.253, M.254, G.255, M.256, G.257, H.258, R.259, L.302, I.307, N.310, D.312
- Ligands: CIT.10
17 PLIP interactions:14 interactions with chain B, 3 interactions with chain A- Hydrogen bonds: B:R.218, B:R.252, B:R.252, B:R.252, B:I.253, B:I.253, B:G.255, B:M.256, B:M.256, B:N.310
- Water bridges: B:R.259
- Salt bridges: B:R.252, B:R.259, A:R.354, A:R.354
- pi-Cation interactions: B:R.252
- Hydrophobic interactions: A:L.355
- 2 x CIT: CITRIC ACID(Non-functional Binders)
CIT.4: 12 residues within 4Å:- Chain A: H.184, N.187, R.218, H.219, G.220, H.258, R.267, D.312, F.333, R.337
- Chain B: R.357
- Ligands: COA.3
18 PLIP interactions:17 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:N.187, A:F.333
- Hydrogen bonds: A:N.187, A:G.220, A:H.258, A:R.267, A:R.267, A:D.312
- Water bridges: A:G.221, A:G.221
- Salt bridges: A:H.184, A:H.184, A:H.219, A:H.219, A:H.258, A:R.267, A:R.337, B:R.357
CIT.10: 12 residues within 4Å:- Chain A: R.357
- Chain B: H.184, N.187, H.219, G.220, H.258, R.267, V.311, D.312, F.333, R.337
- Ligands: COA.9
17 PLIP interactions:16 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:N.187, B:F.333
- Hydrogen bonds: B:N.187, B:H.258, B:R.267, B:R.267
- Water bridges: B:H.219, B:H.219, B:R.337
- Salt bridges: B:H.184, B:H.184, B:H.219, B:H.219, B:H.258, B:R.267, B:R.337, A:R.357
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 8 residues within 4Å:- Chain A: Y.30, L.51, H.52, G.53, R.114, L.346, E.347, E.350
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:L.51, A:R.114, A:R.114, A:L.346
GOL.11: 8 residues within 4Å:- Chain B: Y.30, L.51, H.52, G.53, R.114, L.346, E.347, E.350
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:Y.30, B:L.51, B:R.114, B:R.114, B:L.346, B:E.350
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kanamori, E. et al., Structural comparison between the open and closed forms of citrate synthase from Thermus thermophilus HB8. Biophys Physicobio. (2015)
- Release Date
- 2003-07-29
- Peptides
- citrate synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 5 x SO4: SULFATE ION(Non-functional Binders)
- 2 x COA: COENZYME A(Non-covalent)
- 2 x CIT: CITRIC ACID(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kanamori, E. et al., Structural comparison between the open and closed forms of citrate synthase from Thermus thermophilus HB8. Biophys Physicobio. (2015)
- Release Date
- 2003-07-29
- Peptides
- citrate synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B