- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 5 x SO4: SULFATE ION(Non-functional Binders)
- 2 x COA: COENZYME A(Non-covalent)
COA.4: 17 residues within 4Å:- Chain A: R.218, A.222, R.252, I.253, M.254, G.255, M.256, G.257, H.258, R.259, L.302, R.305, N.310, D.312
- Chain B: R.354, L.355
- Ligands: CIT.5
15 PLIP interactions:12 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:R.218, A:R.252, A:R.252, A:I.253, A:I.253, A:G.255, A:M.256, A:R.305, A:N.310
- Salt bridges: A:R.252, A:R.259, B:R.354, B:R.354
- pi-Cation interactions: A:R.252
- Hydrophobic interactions: B:L.355
COA.9: 18 residues within 4Å:- Chain A: R.354, L.355
- Chain B: E.8, R.218, A.222, R.252, I.253, M.254, G.255, M.256, G.257, H.258, R.259, L.302, I.307, N.310, D.312
- Ligands: CIT.10
15 PLIP interactions:13 interactions with chain B, 2 interactions with chain A- Hydrogen bonds: B:E.8, B:R.218, B:R.252, B:R.252, B:R.252, B:I.253, B:I.253, B:G.255, B:M.256, B:G.257, B:N.310
- Salt bridges: B:R.252, B:R.259, A:R.354
- Water bridges: A:R.354
- 2 x CIT: CITRIC ACID(Non-functional Binders)
CIT.5: 13 residues within 4Å:- Chain A: H.184, N.187, H.219, G.220, H.258, R.267, N.310, V.311, D.312, F.333, R.337
- Chain B: R.357
- Ligands: COA.4
16 PLIP interactions:15 interactions with chain A, 1 interactions with chain B- Hydrophobic interactions: A:N.187, A:F.333
- Hydrogen bonds: A:N.187, A:H.258, A:R.267, A:R.267
- Water bridges: A:H.219, A:H.258
- Salt bridges: A:H.184, A:H.184, A:H.219, A:H.219, A:H.258, A:R.267, A:R.337, B:R.357
CIT.10: 13 residues within 4Å:- Chain A: R.357
- Chain B: H.184, N.187, H.219, G.220, H.258, R.267, N.310, V.311, D.312, F.333, R.337
- Ligands: COA.9
19 PLIP interactions:18 interactions with chain B, 1 interactions with chain A- Hydrophobic interactions: B:N.187, B:V.311, B:F.333
- Hydrogen bonds: B:N.187, B:H.258, B:R.267, B:R.267, B:N.310
- Water bridges: B:H.219, B:H.219, B:H.258
- Salt bridges: B:H.184, B:H.184, B:H.219, B:H.219, B:H.258, B:R.267, B:R.337, A:R.357
- 2 x GOL: GLYCEROL(Non-functional Binders)
GOL.6: 9 residues within 4Å:- Chain A: R.16, Y.30, L.51, H.52, G.53, R.114, L.346, E.347, E.350
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:R.16, A:L.51, A:R.114, A:R.114, A:L.346
GOL.11: 4 residues within 4Å:- Chain B: L.51, H.52, R.114, Y.118
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:L.51, B:H.52, B:R.114, B:R.114
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kanamori, E. et al., Structural comparison between the open and closed forms of citrate synthase from Thermus thermophilus HB8. Biophys Physicobio. (2015)
- Release Date
- 2003-07-29
- Peptides
- citrate synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.30 Å
- Oligo State
- homo-dimer
- Ligands
- 5 x SO4: SULFATE ION(Non-functional Binders)
- 2 x COA: COENZYME A(Non-covalent)
- 2 x CIT: CITRIC ACID(Non-functional Binders)
- 2 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kanamori, E. et al., Structural comparison between the open and closed forms of citrate synthase from Thermus thermophilus HB8. Biophys Physicobio. (2015)
- Release Date
- 2003-07-29
- Peptides
- citrate synthase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
D