SMTL ID : 1jan.1

COMPLEX OF PRO-LEU-GLY-HYDROXYLAMINE WITH THE CATALYTIC DOMAIN OF MATRIX METALLO PROTEINASE-8 (PHE79 FORM)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x PRO- LEU- GLY- HOA: PRO-LEU-GLY-HYDROXYLAMINE INHIBITOR(Non-covalent)

PRO-LEU-GLY-HOA.1: 12 residues within 4Å: Chain A: T.4, S.73, A.83, H.84, A.85, F.86, Q.87, H.119, E.120, H.123, H.129 Ligands: ZN.5 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.86, A:H.123 Hydrogen bonds: A:A.83, A:A.85, A:A.85, A:H.123 Water bridges: A:A.83

2 x CA: CALCIUM ION(Non-covalent)

CA.2: 6 residues within 4Å: Chain A: D.59, N.61, G.91, I.92, G.93, D.95 6 PLIP interactions: 4 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.59, A:G.91, A:G.93, A:D.95, H2O.2, H2O.2 CA.3: 7 residues within 4Å: Chain A: D.76, G.77, P.78, N.79, I.81, D.99, E.102 6 PLIP interactions: 6 interactions with chain A Metal complexes: A:D.76, A:G.77, A:N.79, A:I.81, A:D.99, A:E.102

2 x ZN: ZINC ION(Non-covalent)

ZN.4: 4 residues within 4Å: Chain A: H.69, D.71, H.84, H.97 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.69, A:D.71, A:H.84, A:H.97 ZN.5: 5 residues within 4Å: Chain A: H.119, H.123, H.129 Ligands: PRO-LEU-GLY-HOA.1, PRO-LEU-GLY-HOA.1 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.119, A:H.123, A:H.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Reinemer, P. et al., Structural implications for the role of the N terminus in the 'superactivation' of collagenases. A crystallographic study. FEBS Lett. (1994)

Release Date

1996-07-11

Peptides

MATRIX METALLO PROTEINASE-8 (PHE79 FORM): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

MATRIX METALLO PROTEINASE-8 (PHE79 FORM)

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