- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
APC.2: 20 residues within 4Å:- Chain A: V.247, L.248, S.249, G.251, I.252, D.253, S.254, V.271, S.272, M.273, L.330, L.333, T.346, G.347, Y.348, D.351, K.423, K.443
- Ligands: MG.1, CMA.3
14 PLIP interactions:14 interactions with chain A- Hydrogen bonds: A:S.249, A:I.252, A:D.253, A:S.254, A:M.273, A:M.273, A:G.347, A:G.347
- Water bridges: A:G.251, A:G.251, A:G.349, A:D.351
- Salt bridges: A:K.423, A:K.443
APC.5: 21 residues within 4Å:- Chain B: V.247, L.248, S.249, G.251, I.252, D.253, S.254, V.271, S.272, M.273, L.330, L.333, T.346, G.347, Y.348, D.351, K.423, K.443, L.444
- Ligands: MG.4, CMA.6
15 PLIP interactions:15 interactions with chain B- Hydrogen bonds: B:S.249, B:G.251, B:I.252, B:D.253, B:S.254, B:M.273, B:M.273, B:G.347, B:G.347, B:G.347, B:L.444
- Water bridges: B:S.249, B:G.349
- Salt bridges: B:K.423, B:K.443
- 2 x CMA: N2-(CARBOXYETHYL)-L-ARGININE(Non-covalent)
CMA.3: 9 residues within 4Å:- Chain A: Y.326, Y.348, G.349, D.351, I.352, D.373, L.380, E.382
- Ligands: APC.2
10 PLIP interactions:10 interactions with chain A- Hydrophobic interactions: A:Y.326, A:Y.326, A:Y.348
- Hydrogen bonds: A:G.349, A:D.351, A:D.351, A:I.352
- Water bridges: A:A.350
- Salt bridges: A:D.373, A:E.382
CMA.6: 13 residues within 4Å:- Chain B: Y.326, Y.348, G.349, A.350, D.351, I.352, M.357, D.373, L.380, E.382, K.443
- Ligands: MG.4, APC.5
15 PLIP interactions:15 interactions with chain B- Hydrophobic interactions: B:Y.326, B:Y.348
- Hydrogen bonds: B:Y.326, B:G.349, B:D.351, B:I.352
- Water bridges: B:A.350, B:A.350, B:D.373, B:D.373, B:T.376, B:T.376
- Salt bridges: B:D.373, B:E.382, B:K.443
- 5 x GOL: GLYCEROL(Non-functional Binders)
GOL.7: 7 residues within 4Å:- Chain B: L.245, D.269, T.270, R.294, H.295, D.338, R.342
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:R.294, B:R.342
- Water bridges: B:D.338
GOL.8: 8 residues within 4Å:- Chain B: L.13, A.14, S.15, P.24, D.36, A.47, A.48, T.49
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:D.36
- Water bridges: B:I.37
GOL.9: 1 residues within 4Å:- Chain B: H.372
No protein-ligand interaction detected (PLIP)GOL.10: 5 residues within 4Å:- Chain A: R.402, D.406
- Chain B: S.213, R.215
- Ligands: GOL.11
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:R.402
- Water bridges: B:S.213, B:S.213
GOL.11: 5 residues within 4Å:- Chain B: R.215, L.217, L.407, S.410
- Ligands: GOL.10
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.215, B:R.215
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miller, M.T. et al., Structure of beta-lactam synthetase reveals how to synthesize antibiotics instead of asparagine. Nat.Struct.Biol. (2001)
- Release Date
- 2001-12-28
- Peptides
- BETA-LACTAM SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.95 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 2 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)
- 2 x CMA: N2-(CARBOXYETHYL)-L-ARGININE(Non-covalent)
- 5 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Miller, M.T. et al., Structure of beta-lactam synthetase reveals how to synthesize antibiotics instead of asparagine. Nat.Struct.Biol. (2001)
- Release Date
- 2001-12-28
- Peptides
- BETA-LACTAM SYNTHETASE: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B