- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x BLA: BILIVERDINE IX ALPHA(Covalent)
- 6 x CYC: PHYCOCYANOBILIN(Covalent)
CYC.2: 21 residues within 4Å:- Chain B: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, I.88, Y.92, R.108, C.109, L.113, T.116, Y.117, L.120, T.122, P.123, S.126, V.127
17 PLIP interactions:17 interactions with chain B- Hydrophobic interactions: B:R.78, B:A.81, B:I.88, B:Y.92, B:L.113, B:T.116, B:L.120, B:P.123
- Hydrogen bonds: B:R.84, B:D.85
- Water bridges: B:R.77, B:R.77, B:R.78
- Salt bridges: B:R.77, B:R.77, B:R.84
- pi-Cation interactions: B:R.84
CYC.3: 20 residues within 4Å:- Chain A: N.21, L.24, Q.25, D.28
- Chain B: K.32, N.35, K.36, L.38, D.39, R.43, A.142, N.143, D.144, P.145, I.148, T.149, P.150, G.151, C.153, M.157
17 PLIP interactions:13 interactions with chain B, 4 interactions with chain A- Hydrophobic interactions: B:N.35, B:K.36, B:L.38, B:L.38, B:I.148, A:L.24, A:Q.25
- Hydrogen bonds: B:N.35, B:D.39, B:D.39, B:T.149, B:T.149, B:G.151
- Water bridges: B:N.35, B:T.149, A:K.32, A:K.32
CYC.5: 21 residues within 4Å:- Chain D: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, I.88, Y.92, R.108, C.109, L.113, T.116, Y.117, L.120, T.122, P.123, S.126, V.127
17 PLIP interactions:17 interactions with chain D- Hydrophobic interactions: D:R.78, D:A.81, D:I.88, D:Y.92, D:L.113, D:T.116, D:L.120, D:P.123
- Hydrogen bonds: D:R.84, D:D.85
- Water bridges: D:R.77, D:R.77, D:R.78
- Salt bridges: D:R.77, D:R.77, D:R.84
- pi-Cation interactions: D:R.84
CYC.6: 20 residues within 4Å:- Chain C: N.21, L.24, Q.25, D.28
- Chain D: K.32, N.35, K.36, L.38, D.39, R.43, A.142, N.143, D.144, P.145, I.148, T.149, P.150, G.151, C.153, M.157
17 PLIP interactions:4 interactions with chain C, 13 interactions with chain D- Hydrophobic interactions: C:L.24, C:Q.25, D:N.35, D:K.36, D:L.38, D:L.38, D:I.148
- Water bridges: C:K.32, C:K.32, D:N.35, D:T.149
- Hydrogen bonds: D:N.35, D:D.39, D:D.39, D:T.149, D:T.149, D:G.151
CYC.8: 21 residues within 4Å:- Chain F: L.66, N.72, A.73, R.77, R.78, A.81, C.82, R.84, D.85, I.88, Y.92, R.108, C.109, L.113, T.116, Y.117, L.120, T.122, P.123, S.126, V.127
17 PLIP interactions:17 interactions with chain F- Hydrophobic interactions: F:R.78, F:A.81, F:I.88, F:Y.92, F:L.113, F:T.116, F:L.120, F:P.123
- Hydrogen bonds: F:R.84, F:D.85
- Water bridges: F:R.77, F:R.77, F:R.78
- Salt bridges: F:R.77, F:R.77, F:R.84
- pi-Cation interactions: F:R.84
CYC.9: 20 residues within 4Å:- Chain E: N.21, L.24, Q.25, D.28
- Chain F: K.32, N.35, K.36, L.38, D.39, R.43, A.142, N.143, D.144, P.145, I.148, T.149, P.150, G.151, C.153, M.157
17 PLIP interactions:13 interactions with chain F, 4 interactions with chain E- Hydrophobic interactions: F:N.35, F:K.36, F:L.38, F:L.38, F:I.148, E:L.24, E:Q.25
- Hydrogen bonds: F:N.35, F:D.39, F:D.39, F:T.149, F:T.149, F:G.151
- Water bridges: F:N.35, F:T.149, E:K.32, E:K.32
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Adir, N. et al., Refined structure of c-phycocyanin from the cyanobacterium Synechococcus vulcanus at 1.6 A: insights into the role of solvent molecules in thermal stability and co-factor structure. Biochim.Biophys.Acta (2002)
- Release Date
- 2002-03-06
- Peptides
- C-PHYCOCYANIN ALPHA SUBUNIT: ACE
C-PHYCOCYANIN BETA SUBUNIT: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AB
BD
BF
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- hetero-3-3-mer
- Ligands
- 3 x BLA: BILIVERDINE IX ALPHA(Covalent)
- 6 x CYC: PHYCOCYANOBILIN(Covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Adir, N. et al., Refined structure of c-phycocyanin from the cyanobacterium Synechococcus vulcanus at 1.6 A: insights into the role of solvent molecules in thermal stability and co-factor structure. Biochim.Biophys.Acta (2002)
- Release Date
- 2002-03-06
- Peptides
- C-PHYCOCYANIN ALPHA SUBUNIT: ACE
C-PHYCOCYANIN BETA SUBUNIT: BDF - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AC
AE
AB
BD
BF
B