- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-octamer
- Ligands
- 16 x FE2: FE (II) ION(Non-covalent)
- 16 x BP3: 2'-CHLORO-BIPHENYL-2,3-DIOL(Non-covalent)
BP3.3: 14 residues within 4Å:- Chain A: H.145, V.147, I.172, M.174, F.186, H.194, F.201, H.209, H.240, N.242, Y.249, E.259, P.279
- Ligands: FE2.1
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:I.172, A:F.186, A:F.186, A:F.201, A:P.279
- pi-Stacking: A:H.240
BP3.4: 8 residues within 4Å:- Chain A: L.203, P.204, K.205, H.208, S.254, G.255, V.256, E.257
6 PLIP interactions:6 interactions with chain A- Hydrophobic interactions: A:L.203, A:P.204, A:K.205
- Hydrogen bonds: A:E.257
- Water bridges: A:G.255, A:E.257
BP3.7: 14 residues within 4Å:- Chain B: H.145, V.147, I.172, M.174, F.186, H.194, F.201, H.209, H.240, N.242, Y.249, E.259, P.279
- Ligands: FE2.5
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:I.172, B:F.186, B:F.186, B:F.201, B:P.279
- pi-Stacking: B:H.240
BP3.8: 8 residues within 4Å:- Chain B: L.203, P.204, K.205, H.208, S.254, G.255, V.256, E.257
6 PLIP interactions:6 interactions with chain B- Hydrophobic interactions: B:L.203, B:P.204, B:K.205
- Hydrogen bonds: B:E.257
- Water bridges: B:G.255, B:E.257
BP3.11: 14 residues within 4Å:- Chain C: H.145, V.147, I.172, M.174, F.186, H.194, F.201, H.209, H.240, N.242, Y.249, E.259, P.279
- Ligands: FE2.9
6 PLIP interactions:6 interactions with chain C- Hydrophobic interactions: C:I.172, C:F.186, C:F.186, C:F.201, C:P.279
- pi-Stacking: C:H.240
BP3.12: 8 residues within 4Å:- Chain C: L.203, P.204, K.205, H.208, S.254, G.255, V.256, E.257
6 PLIP interactions:6 interactions with chain C- Hydrophobic interactions: C:L.203, C:P.204, C:K.205
- Hydrogen bonds: C:E.257
- Water bridges: C:G.255, C:E.257
BP3.15: 14 residues within 4Å:- Chain D: H.145, V.147, I.172, M.174, F.186, H.194, F.201, H.209, H.240, N.242, Y.249, E.259, P.279
- Ligands: FE2.13
6 PLIP interactions:6 interactions with chain D- Hydrophobic interactions: D:I.172, D:F.186, D:F.186, D:F.201, D:P.279
- pi-Stacking: D:H.240
BP3.16: 8 residues within 4Å:- Chain D: L.203, P.204, K.205, H.208, S.254, G.255, V.256, E.257
6 PLIP interactions:6 interactions with chain D- Hydrophobic interactions: D:L.203, D:P.204, D:K.205
- Hydrogen bonds: D:E.257
- Water bridges: D:G.255, D:E.257
BP3.19: 14 residues within 4Å:- Chain E: H.145, V.147, I.172, M.174, F.186, H.194, F.201, H.209, H.240, N.242, Y.249, E.259, P.279
- Ligands: FE2.17
7 PLIP interactions:7 interactions with chain E- Hydrophobic interactions: E:I.172, E:F.186, E:F.186, E:F.201, E:P.279
- Hydrogen bonds: E:Y.249
- pi-Stacking: E:H.240
BP3.20: 8 residues within 4Å:- Chain E: L.203, P.204, K.205, H.208, S.254, G.255, V.256, E.257
5 PLIP interactions:5 interactions with chain E- Hydrophobic interactions: E:L.203, E:P.204, E:K.205
- Water bridges: E:G.255, E:E.257
BP3.23: 14 residues within 4Å:- Chain F: H.145, V.147, I.172, M.174, F.186, H.194, F.201, H.209, H.240, N.242, Y.249, E.259, P.279
- Ligands: FE2.21
7 PLIP interactions:7 interactions with chain F- Hydrophobic interactions: F:I.172, F:F.186, F:F.186, F:F.201, F:P.279
- Hydrogen bonds: F:Y.249
- pi-Stacking: F:H.240
BP3.24: 8 residues within 4Å:- Chain F: L.203, P.204, K.205, H.208, S.254, G.255, V.256, E.257
5 PLIP interactions:5 interactions with chain F- Hydrophobic interactions: F:L.203, F:P.204, F:K.205
- Water bridges: F:G.255, F:E.257
BP3.27: 14 residues within 4Å:- Chain G: H.145, V.147, I.172, M.174, F.186, H.194, F.201, H.209, H.240, N.242, Y.249, E.259, P.279
- Ligands: FE2.25
7 PLIP interactions:7 interactions with chain G- Hydrophobic interactions: G:I.172, G:F.186, G:F.186, G:F.201, G:P.279
- Hydrogen bonds: G:Y.249
- pi-Stacking: G:H.240
BP3.28: 8 residues within 4Å:- Chain G: L.203, P.204, K.205, H.208, S.254, G.255, V.256, E.257
5 PLIP interactions:5 interactions with chain G- Hydrophobic interactions: G:L.203, G:P.204, G:K.205
- Water bridges: G:G.255, G:E.257
BP3.31: 14 residues within 4Å:- Chain H: H.145, V.147, I.172, M.174, F.186, H.194, F.201, H.209, H.240, N.242, Y.249, E.259, P.279
- Ligands: FE2.29
9 PLIP interactions:9 interactions with chain H- Hydrophobic interactions: H:I.172, H:F.186, H:F.186, H:F.201, H:P.279
- Hydrogen bonds: H:H.209, H:Y.249, H:E.259
- pi-Stacking: H:H.240
BP3.32: 8 residues within 4Å:- Chain H: L.203, P.204, K.205, H.208, S.254, G.255, V.256, E.257
5 PLIP interactions:5 interactions with chain H- Hydrophobic interactions: H:L.203, H:P.204, H:K.205
- Water bridges: H:G.255, H:E.257
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dai, S. et al., Identification and analysis of a bottleneck in PCB biodegradation. Nat.Struct.Biol. (2002)
- Release Date
- 2002-11-27
- Peptides
- BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.70 Å
- Oligo State
- homo-octamer
- Ligands
- 16 x FE2: FE (II) ION(Non-covalent)
- 16 x BP3: 2'-CHLORO-BIPHENYL-2,3-DIOL(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Dai, S. et al., Identification and analysis of a bottleneck in PCB biodegradation. Nat.Struct.Biol. (2002)
- Release Date
- 2002-11-27
- Peptides
- BIPHENYL-2,3-DIOL 1,2-DIOXYGENASE: ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A