SMTL ID : 1lky.2 (4 other biounits)

Structure of the wild-type TEL-SAM polymer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-3-3-mer

Ligands

11 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: P.5, A.6, H.7, Q.22 Chain C: R.9, L.10, Q.11, Y.14 6 PLIP interactions: 4 interactions with chain A, 2 interactions with chain C Hydrogen bonds: A:A.6, A:H.7, A:Q.22, C:Q.11, C:Q.11 Salt bridges: A:H.7 SO4.2: 6 residues within 4Å: Chain A: S.16, R.17, N.44 Chain B: S.32 Chain E: A.6, R.9 6 PLIP interactions: 3 interactions with chain E, 1 interactions with chain B, 2 interactions with chain A Water bridges: E:A.6, E:R.9, A:D.18 Salt bridges: E:R.9 Hydrogen bonds: B:S.32, A:R.17 SO4.3: 5 residues within 4Å: Chain A: K.25 Chain C: S.16, R.17, N.44 Chain D: S.32 5 PLIP interactions: 3 interactions with chain C, 1 interactions with chain A, 1 interactions with chain D Hydrogen bonds: C:R.17, C:N.44, D:S.32 Water bridges: C:D.18 Salt bridges: A:K.25 SO4.4: 1 residues within 4Å: Chain B: I.13 No protein-ligand interaction detected (PLIP) SO4.5: 1 residues within 4Å: Chain B: P.5 No protein-ligand interaction detected (PLIP) SO4.6: 2 residues within 4Å: Chain B: K.25, S.38 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.38 Salt bridges: B:K.25 SO4.7: 4 residues within 4Å: Chain C: P.35, R.59, S.60, P.61 1 PLIP interactions: 1 interactions with chain C Water bridges: C:H.62 SO4.8: 6 residues within 4Å: Chain C: K.25, S.38 Chain E: S.16, R.17, N.44 Chain F: S.32 7 PLIP interactions: 1 interactions with chain E, 4 interactions with chain C, 2 interactions with chain F Hydrogen bonds: E:R.17, C:S.38, C:S.38, C:S.38, F:S.32, F:S.32 Salt bridges: C:K.25 SO4.9: 5 residues within 4Å: Chain D: R.34, P.35, S.60, P.61, H.62 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:S.60, D:H.62 Salt bridges: D:R.34 SO4.10: 2 residues within 4Å: Chain D: D.55, R.59 1 PLIP interactions: 1 interactions with chain D Salt bridges: D:R.59 SO4.11: 4 residues within 4Å: Chain C: P.5, A.6 Chain E: L.10, Q.11 2 PLIP interactions: 1 interactions with chain E, 1 interactions with chain C Hydrogen bonds: E:Q.11, C:A.6

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tran, H.H. et al., Native interface of the SAM domain polymer of TEL. BMC STRUCT.BIOL. (2002)

Release Date

2002-06-12

Peptides

TRANSCRIPTION FACTOR ETV6: ACE
TRANSCRIPTION FACTOR ETV6: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

C
A

E
C

B
F

D
B

F
D

TRANSCRIPTION FACTOR ETV6

TRANSCRIPTION FACTOR ETV6

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