SMTL ID : 1lky.5 (4 other biounits)

Structure of the wild-type TEL-SAM polymer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

hetero-3-3-mer

Ligands

11 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: P.35, R.59, S.60, P.61 1 PLIP interactions: 1 interactions with chain A Water bridges: A:H.62 SO4.2: 2 residues within 4Å: Chain A: K.25, S.38 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.38, A:S.38, A:S.38 Salt bridges: A:K.25 SO4.3: 5 residues within 4Å: Chain B: R.34, P.35, S.60, P.61, H.62 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:S.60, B:H.62 Salt bridges: B:R.34 SO4.4: 6 residues within 4Å: Chain B: D.55, R.59 Chain C: K.53, D.65, R.66, E.69 7 PLIP interactions: 2 interactions with chain B, 5 interactions with chain C Water bridges: B:R.59, C:R.66 Salt bridges: B:R.59, C:K.53, C:R.66 Hydrogen bonds: C:E.69, C:E.69 SO4.5: 2 residues within 4Å: Chain C: L.10, Q.11 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:Q.11 SO4.6: 8 residues within 4Å: Chain A: R.9, L.10, Q.11, Y.14 Chain E: P.5, A.6, H.7, Q.22 6 PLIP interactions: 4 interactions with chain E, 2 interactions with chain A Hydrogen bonds: E:A.6, E:H.7, E:Q.22, A:Q.11, A:Q.11 Salt bridges: E:H.7 SO4.7: 4 residues within 4Å: Chain E: S.16, R.17, N.44 Chain F: S.32 3 PLIP interactions: 2 interactions with chain E, 1 interactions with chain F Hydrogen bonds: E:R.17, F:S.32 Water bridges: E:D.18 SO4.8: 5 residues within 4Å: Chain A: S.16, R.17, N.44 Chain B: S.32 Chain E: K.25 5 PLIP interactions: 1 interactions with chain B, 3 interactions with chain A, 1 interactions with chain E Hydrogen bonds: B:S.32, A:R.17, A:N.44 Water bridges: A:D.18 Salt bridges: E:K.25 SO4.9: 1 residues within 4Å: Chain F: I.13 No protein-ligand interaction detected (PLIP) SO4.10: 1 residues within 4Å: Chain F: P.5 No protein-ligand interaction detected (PLIP) SO4.11: 2 residues within 4Å: Chain F: K.25, S.38 2 PLIP interactions: 2 interactions with chain F Hydrogen bonds: F:S.38 Salt bridges: F:K.25

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tran, H.H. et al., Native interface of the SAM domain polymer of TEL. BMC STRUCT.BIOL. (2002)

Release Date

2002-06-12

Peptides

TRANSCRIPTION FACTOR ETV6: ACE
TRANSCRIPTION FACTOR ETV6: BDF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

E
E

B
B

D
D

F
F

TRANSCRIPTION FACTOR ETV6

TRANSCRIPTION FACTOR ETV6

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