SMTL ID : 1lp6.1

Crystal structure of orotidine monophosphate decarboxylase complexed with CMP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

2 x C5P: CYTIDINE-5'-MONOPHOSPHATE(Non-covalent)

C5P.1: 12 residues within 4Å: Chain A: A.18, D.20, K.42, D.70, S.127, S.158, P.180, I.200, V.201, G.202, R.203 Chain B: I.76 13 PLIP interactions: 12 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:D.20, A:K.42, A:D.70, A:G.202, A:R.203 Water bridges: A:K.72, A:K.72, A:S.127, A:S.127, A:H.128, A:S.158, A:S.204 Hydrophobic interactions: B:I.76 C5P.2: 11 residues within 4Å: Chain A: I.76, E.78 Chain B: A.18, D.20, K.42, D.70, S.158, P.180, V.201, G.202, R.203 12 PLIP interactions: 11 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:D.20, B:K.42, B:D.70, B:S.158, B:G.202, B:R.203, A:E.78 Water bridges: B:D.20, B:K.72, B:S.127, B:S.204 Salt bridges: B:R.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, N. et al., Crystal structures of inhibitor complexes reveal an alternate binding mode in orotidine-5'-monophosphate decarboxylase. J.Biol.Chem. (2002)

Release Date

2002-08-07

Peptides

orotidine monophosphate decarboxylase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

orotidine monophosphate decarboxylase

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