SMTL ID : 1m13.1

Crystal Structure of the Human Pregane X Receptor Ligand Binding Domain in Complex with Hyperforin, a Constituent of St. John's Wort

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x HYF: 4-HYDROXY-5-ISOBUTYRYL-6-METHYL-1,3,7-TRIS-(3-METHYL-BUT-2-ENYL)-6-(4-METHYL-PENT-3-ENYL)-BICYCLO[3.3.1]NON-3-ENE-2,9-DIONE(Non-covalent)

HYF.1: 14 residues within 4Å: Chain A: L.91, L.122, M.125, S.129, F.163, C.166, Q.167, F.170, W.181, M.205, H.289, L.293, I.296, F.302 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.91, A:L.91, A:L.122, A:M.125, A:F.163, A:F.163, A:F.170, A:F.170, A:W.181, A:W.181, A:I.296, A:F.302 Hydrogen bonds: A:S.129

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Watkins, R.E. et al., 2.1 A Crystal Structure of Human PXR in Complex with the St. John's Wort Compound Hyperforin. Biochemistry (2003)

Release Date

2003-03-04

Peptides

Orphan Nuclear Receptor PXR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Orphan Nuclear Receptor PXR

Related Entries With Identical Sequence