SMTL ID : 7axe.1 (1 other biounit)

Crystal structure of the hPXR-LBD in complex with oxadiazon

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 5 residues within 4Å: Chain A: T.172, L.217, H.218, E.219 Ligands: IPA.3 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.172 Water bridges: A:L.217, A:E.219

1 x S6Z: oxadiazon(Non-covalent)

S6Z.2: 16 residues within 4Å: Chain A: L.91, M.125, A.126, M.128, S.129, F.133, F.163, C.166, Q.167, F.170, W.181, M.205, H.289, L.293, F.302, F.311 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:M.125, A:F.133, A:F.163, A:F.170, A:W.181 Hydrogen bonds: A:Q.167

1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.3: 7 residues within 4Å: Chain A: T.172, V.173, F.174, N.175, E.182, K.213 Ligands: GOL.1 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:N.175 Hydrogen bonds: A:E.182 Water bridges: A:T.172

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Delfosse, V. et al., Mechanistic insights into the synergistic activation of the RXR-PXR heterodimer by endocrine disruptor mixtures. Proc.Natl.Acad.Sci.USA (2021)

Release Date

2021-01-13

Peptides

Nuclear receptor subfamily 1 group I member 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Nuclear receptor subfamily 1 group I member 2

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