SMTL ID : 1m5k.2 (1 other biounit)

Crystal structure of a hairpin ribozyme in the catalytically-active conformation

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

17 x CA: CALCIUM ION(Non-functional Binders)

CA.1: 1 residues within 4Å: Chain A: C.21 No protein-ligand interaction detected (PLIP) CA.2: 3 residues within 4Å: Chain B: A.22, A.59, U.60 No protein-ligand interaction detected (PLIP) CA.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.4: 2 residues within 4Å: Chain B: U.38, G.39 No protein-ligand interaction detected (PLIP) CA.5: 1 residues within 4Å: Chain B: A.59 No protein-ligand interaction detected (PLIP) CA.6: 1 residues within 4Å: Chain B: A.24 No protein-ligand interaction detected (PLIP) CA.7: 1 residues within 4Å: Chain B: U.53 No protein-ligand interaction detected (PLIP) CA.8: 1 residues within 4Å: Chain B: G.1 No protein-ligand interaction detected (PLIP) CA.9: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.10: 2 residues within 4Å: Chain B: C.35, A.36 No protein-ligand interaction detected (PLIP) CA.11: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.12: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) CA.13: 2 residues within 4Å: Chain B: G.6, A.7 No protein-ligand interaction detected (PLIP) CA.14: 2 residues within 4Å: Chain B: G.47, G.48 No protein-ligand interaction detected (PLIP) CA.15: 4 residues within 4Å: Chain B: G.71, U.81, C.82, G.83 No protein-ligand interaction detected (PLIP) CA.16: 1 residues within 4Å: Chain B: G.19 No protein-ligand interaction detected (PLIP) CA.17: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rupert, P.B. et al., Transition state stabilization by a catalytic RNA. Science (2002)

Release Date

2002-08-02

Peptides

PROTEIN (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A): C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
C

PROTEIN (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A)

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