SMTL ID : 1nb7.2 (1 other biounit)

HC-J4 RNA polymerase complexed with short RNA template strand

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

1 x U- U- U- U: 5'-R(*UP*UP*UP*U)-3'(Non-covalent)

U-U-U-U.1: 28 residues within 4Å: Chain A: C.14, P.93, H.95, S.96, A.97, K.98, M.139, K.141, R.158, I.160, F.162, R.168, D.225, S.282, G.283, T.287, S.288, N.291, I.405, D.444, Q.446, G.449, C.451, Y.555, S.556, G.557, G.558, D.559 Protein-ligand interaction information (PLIP) not available

2 x MN: MANGANESE (II) ION(Non-covalent)

MN.2: 3 residues within 4Å: Chain A: D.220, D.318, D.319 No protein-ligand interaction detected (PLIP) MN.3: 5 residues within 4Å: Chain A: D.220, T.221, R.222, F.224, D.318 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:T.221

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

O'Farrell, D. et al., Substrate complexes of hepatitis C virus RNA polymerase (HC-J4): structural evidence for nucleotide import and de-novo initiation. J.Mol.Biol. (2003)

Release Date

2003-03-25

Peptides

polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

polyprotein

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