SMTL ID : 1nje.1

THYMIDYLATE SYNTHASE WITH 2'-DEOXYCYTIDINE 5'-MONOPHOSPHATE (DCMP)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-dimer

Ligands

2 x DCM: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE(Non-covalent)

DCM.1: 14 residues within 4Å: Chain A: R.23, L.195, C.198, Q.217, R.218, S.219, A.220, D.221, G.225, N.229, H.259, Y.261 Chain B: R.178, R.179 12 PLIP interactions: 8 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:Q.217, A:S.219, A:D.221, A:G.225, A:N.229, A:H.259, B:R.178 Salt bridges: A:R.23, A:R.218, B:R.178, B:R.179 Water bridges: B:R.179 DCM.2: 14 residues within 4Å: Chain A: R.178, R.179 Chain B: R.23, L.195, C.198, Q.217, R.218, S.219, A.220, D.221, G.225, N.229, H.259, Y.261 14 PLIP interactions: 10 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:Q.217, B:S.219, B:D.221, B:G.225, B:N.229, B:H.259, B:Y.261, A:R.178 Water bridges: B:D.221, A:R.179 Salt bridges: B:R.23, B:R.218, A:R.178, A:R.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Finer-Moore, J.S. et al., Partitioning roles of side chains in affinity, orientation, and catalysis with structures for mutant complexes: asparagine-229 in thymidylate synthase. Biochemistry (1996)

Release Date

1996-07-11

Peptides

THYMIDYLATE SYNTHASE: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

THYMIDYLATE SYNTHASE

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